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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid

Predictor Summary:
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 4
  • peroxisome 3
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plastid
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:golgi
Predotar:plastid
PProwler:peroxisome
PTS1:peroxisome
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015513_P001 Maize golgi, peroxisome, plastid, vacuole 93.59 92.77
TraesCS6D01G136600.2 Wheat extracellular, vacuole 86.59 86.34
Os02t0180700-01 Rice extracellular 84.55 84.3
HORVU6Hr1G028980.18 Barley endoplasmic reticulum, extracellular 83.97 83.48
TraesCS6B01G175600.2 Wheat plastid 86.88 77.81
TraesCS6A01G147300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 85.42 68.78
GSMUA_Achr11P... Banana plastid 62.1 63.96
OQU89100 Sorghum cytosol 64.14 63.58
KRH47350 Soybean cytosol 58.6 60.54
Solyc03g116910.2.1 Tomato endoplasmic reticulum, peroxisome, plastid 58.02 59.94
PGSC0003DMT400051049 Potato endoplasmic reticulum, peroxisome, plastid 58.02 59.94
KRH44552 Soybean cytosol 58.02 59.76
PGSC0003DMT400073398 Potato cytosol, endoplasmic reticulum, mitochondrion, plastid 56.85 58.73
KRH09656 Soybean cytosol 57.43 58.63
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 56.56 58.43
CDY35052 Canola cytosol 46.36 57.61
VIT_09s0070g00240.t01 Wine grape cytosol 56.27 57.1
KRH23636 Soybean cytosol 55.98 56.8
CDX81743 Canola cytosol 55.69 56.18
Bra026090.1-P Field mustard cytosol 55.69 56.01
Bra026737.1-P Field mustard cytosol 55.98 55.98
CDY52857 Canola cytosol 55.98 55.98
EER89338 Sorghum cytosol 56.27 55.78
AT1G80820.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 53.94 55.72
Bra035150.1-P Field mustard cytosol 53.94 55.72
CDX87345 Canola cytosol 53.94 55.72
CDY33365 Canola cytosol 55.69 55.69
CDY63972 Canola cytosol 53.64 55.59
AT1G15950.1 Thale cress cytosol 55.39 55.23
CDY39941 Canola cytosol 53.35 55.12
Bra008438.1-P Field mustard cytosol 53.06 54.98
CDY64860 Canola cytosol 53.06 54.98
EES05992 Sorghum cytosol 49.85 51.66
EES15061 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 55.69 51.07
KXG32196 Sorghum cytosol 48.4 50.76
OQU85928 Sorghum cytosol 50.73 50.73
KXG32301 Sorghum plastid 46.94 49.09
KXG37270 Sorghum cytosol 37.32 39.02
KXG30065 Sorghum plastid 37.9 38.92
EER93204 Sorghum cytosol 37.32 38.79
EES14250 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 37.03 37.91
EES01693 Sorghum endoplasmic reticulum, golgi, plastid 35.86 37.85
EES02561 Sorghum cytosol 35.57 37.54
EER99113 Sorghum mitochondrion 35.28 36.78
EES01690 Sorghum cytosol 34.99 36.36
EES01692 Sorghum cytosol 33.82 35.37
Protein Annotations
EnsemblPlants:EES04640EnsemblPlantsGene:SORBI_3004G065600EntrezGene:8079406Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF432
PFAM:PF01370ProteinID:EES04640ProteinID:EES04640.1RefSeq:XP_002451664.1SUPFAM:SSF51735TMHMM:TMhelix
unigene:Sbi.2512UniParc:UPI0001A85662UniProt:C5XWV7MapMan:21.6.1.5::
Description
hypothetical protein
Coordinates
chr4:+:5305396..5308691
Molecular Weight (calculated)
37892.7 Da
IEP (calculated)
8.793
GRAVY (calculated)
-0.217
Length
343 amino acids
Sequence
(BLAST)
001: MAVVVCVTGA GGFIGSWIVK ILLARGYAVR GTSRRADDPK NAHLWALDGA AERLTMLQVD LLDRASLRAA FRGCDGVIHT ASPMHDNPEE IIEPIIVGTR
101: NVVEAAADAG VRRLVLSSTI GTMYMDPRRD PDAALGDSSW SDLEYCKSTK NWYCYAKTIA EQGAWEAARA RGLDLAVVIP VVVLGELLQP SMNTSTLHIL
201: KYLTGQTKEY VNESHAYVHV KDAAEAHVRV LEAPGAGGRR YVCAERTLHR GELCRILAGL FPEYPIPTRC KDQVNPPKKG YKFTNQPLKD LGIKFTPVHE
301: YLYEAVKSLQ EKGFLQKTSN TKVPERRSRL PEQSQPPVLI SKL
Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.