Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35420.1 | EES07849 | AT3G08530.1 | 21798944 |
| AT4G35420.1 | KXG22761 | AT3G08530.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020970_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 94.53 | 93.96 |
| TraesCS5B01G271500.1 | Wheat | mitochondrion | 84.8 | 80.17 |
| TraesCS5A01G271200.1 | Wheat | mitochondrion | 84.5 | 79.89 |
| TraesCS5D01G278800.1 | Wheat | mitochondrion | 84.19 | 79.6 |
| Os09t0493500-02 | Rice | plastid | 82.98 | 74.59 |
| VIT_03s0038g04220.t01 | Wine grape | endoplasmic reticulum | 67.78 | 69.04 |
| EES14250 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 69.91 | 68.66 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.87 | 67.69 |
| AT4G35420.1 | Thale cress | extracellular | 64.13 | 64.72 |
| PGSC0003DMT400065107 | Potato | cytosol | 65.35 | 64.18 |
| CDY24810 | Canola | cytosol | 61.7 | 64.04 |
| CDY41656 | Canola | cytosol, plastid, vacuole | 61.4 | 63.72 |
| CDX75502 | Canola | cytosol, extracellular, plastid | 61.7 | 63.64 |
| Solyc04g008780.2.1 | Tomato | cytosol | 65.35 | 63.61 |
| CDX69139 | Canola | cytosol, extracellular, plastid | 61.4 | 63.32 |
| KRH09917 | Soybean | mitochondrion | 63.83 | 63.25 |
| Bra010535.1-P | Field mustard | cytosol | 59.57 | 63.23 |
| KRH23414 | Soybean | mitochondrion | 63.22 | 62.84 |
| VIT_03s0038g04230.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 44.07 | 57.77 |
| EES02561 | Sorghum | cytosol | 45.59 | 46.15 |
| KXG30065 | Sorghum | plastid | 43.47 | 42.81 |
| OQU89100 | Sorghum | cytosol | 41.34 | 39.31 |
| EES05992 | Sorghum | cytosol | 39.21 | 38.97 |
| KXG32196 | Sorghum | cytosol | 38.6 | 38.84 |
| OQU85928 | Sorghum | cytosol | 40.12 | 38.48 |
| EER89338 | Sorghum | cytosol | 40.43 | 38.44 |
| KXG32301 | Sorghum | plastid | 37.99 | 38.11 |
| KXG37270 | Sorghum | cytosol | 37.69 | 37.8 |
| EER93204 | Sorghum | cytosol | 37.08 | 36.97 |
| EES15061 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 41.64 | 36.63 |
| EES01693 | Sorghum | endoplasmic reticulum, golgi, plastid | 35.56 | 36.0 |
| EES04640 | Sorghum | golgi, plastid | 36.78 | 35.28 |
| EES01692 | Sorghum | cytosol | 34.35 | 34.45 |
| EES01690 | Sorghum | cytosol | 33.74 | 33.64 |
Protein Annotations
| MapMan:21.8.1.5 | Gene3D:3.40.50.720 | EntrezGene:8055885 | UniProt:C5X4I6 | EnsemblPlants:EER99113 | ProteinID:EER99113 |
| ProteinID:EER99113.1 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0050662 | GO:GO:0080110 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01370 | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF493 | EnsemblPlantsGene:SORBI_3002G251200 | SUPFAM:SSF51735 | unigene:Sbi.9745 | InterPro:TKPR1 | UniParc:UPI0001A84309 |
| RefSeq:XP_002462592.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:63817818..63821007
Molecular Weight (calculated)
36329.5 Da
IEP (calculated)
7.222
GRAVY (calculated)
-0.120
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSNKGKVC VTGASGFIAS WLIKRLLESG YHVVGTVRDP GNHQKTAHLW KLPGAKERLQ IVRADLLEEG SFDNAVMDCD GVFHTASPVL AKSDSSSKEE
101: TLVPAVNGTL NVLRSCKKNP FLKRVVLTSS SSAVRIRDDD QPNISLDETT WSSVPLCEKM QLWYALAKVF AEKAAWEFAK ENNIDLVTVL PSFVIGPSLS
201: HELCVTASDV LGLFQGDTAR FSSYGRMGYV HIDDVASSHI LVYETPHATG RYLCSSVVLD NDELVSLLAK RYPVFPIPRR LNSPYGKQSY QLNTSKLQGL
301: GFKFRGVQEM FDDCVQSLKD QGHLLECPL
101: TLVPAVNGTL NVLRSCKKNP FLKRVVLTSS SSAVRIRDDD QPNISLDETT WSSVPLCEKM QLWYALAKVF AEKAAWEFAK ENNIDLVTVL PSFVIGPSLS
201: HELCVTASDV LGLFQGDTAR FSSYGRMGYV HIDDVASSHI LVYETPHATG RYLCSSVVLD NDELVSLLAK RYPVFPIPRR LNSPYGKQSY QLNTSKLQGL
301: GFKFRGVQEM FDDCVQSLKD QGHLLECPL
001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP
Arabidopsis Description
TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.