Factsheet for Solyc04g008780.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
peroxisome 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g096000.2.1
Solyc05g052510.2.1
Solyc06g051310.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35420.1	Solyc03g096000.2.1	AT3G08530.1	21798944
AT4G35420.1	Solyc05g052510.2.1	AT3G08530.1	21798944
AT4G35420.1	Solyc06g051310.2.1	AT3G08530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065107	Potato	cytosol	97.63	98.51
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	70.41	73.68
CDX75502	Canola	cytosol, extracellular, plastid	67.75	71.79
CDY24810	Canola	cytosol	67.16	71.61
CDX69139	Canola	cytosol, extracellular, plastid	67.46	71.47
AT4G35420.1	Thale cress	extracellular	68.64	71.17
Bra010535.1-P	Field mustard	cytosol	64.79	70.65
CDY41656	Canola	cytosol, plastid, vacuole	65.98	70.35
GSMUA_AchrUn_...	Banana	cytosol	64.79	67.38
KRH23414	Soybean	mitochondrion	64.5	65.86
KRH09917	Soybean	mitochondrion	64.5	65.66
EER99113	Sorghum	mitochondrion	63.61	65.35
Os08t0515900-01	Rice	cytosol	56.51	64.75
Zm00001d020970_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.31	64.65
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.95	62.61
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.65	62.31
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	46.15	62.15
TraesCS5A01G271200.1	Wheat	mitochondrion	62.13	60.34
TraesCS5B01G271500.1	Wheat	mitochondrion	62.13	60.34
EES14250	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.76	60.3
TraesCS5D01G278800.1	Wheat	mitochondrion	61.83	60.06
Os09t0493500-02	Rice	plastid	61.54	56.83
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	61.24	55.05
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	45.27	47.81
Zm00001d031488_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	47.93	47.23
Solyc01g008550.2.1	Tomato	extracellular, nucleus	44.08	46.56
Solyc01g008530.2.1	Tomato	endoplasmic reticulum	44.67	46.04
Solyc01g008540.2.1	Tomato	endoplasmic reticulum	42.6	44.58
Solyc01g087640.2.1	Tomato	cytosol	42.9	44.21
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	42.31	43.07
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	41.12	41.87
Solyc11g072510.1.1	Tomato	cytosol, extracellular	38.76	40.43
Solyc01g102730.2.1	Tomato	cytosol, peroxisome, plastid	35.21	36.5

Protein Annotations

MapMan:21.8.1.5	Gene3D:3.40.50.720	InterPro:Epimerase_deHydtase	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653
GO:GO:0009791	GO:GO:0009987	GO:GO:0010584	GO:GO:0016043	GO:GO:0048316	GO:GO:0050662
GO:GO:0080110	UniProt:K4BP34	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF493
SUPFAM:SSF51735	EnsemblPlantsGene:Solyc04g008780.2	EnsemblPlants:Solyc04g008780.2.1	InterPro:TKPR1	UniParc:UPI0002767320	SEG:seg

Description

Tetraketide alpha-pyrone reductase 1 [Source:Projected from Arabidopsis thaliana (AT4G35420) UniProtKB/Swiss-Prot;Acc:Q500U8]

Coordinates

chr4:+:2420696..2423766

Molecular Weight (calculated)

37874.6 Da

IEP (calculated)

6.623

GRAVY (calculated)

-0.169

Length

338 amino acids

Sequence
(BLAST)

001: MEIMEDKNVV EEENSNYKGK VCVTGASGFV ASWLIKRLLL SGYNVIGTVR DPGNQKKVGH LWKLQGAKER LRLVKANLTD EGSFDDAIMG CEGVFHTASP
101: VLGKATFDVT VEILNPAVDG TLNVLRSCKK NPRLRRVVLT SSSSTVRVRD EIDPNIPLDE SSWSSVEFCK KFKIWYVLSK TLAEKAAWEF CEQNNIDLVT
201: LLPSFIIGPS LPPDLCSTAD DVLGLLKGKT DKFDFHGRMG YVHIDDVALS HILVYEHPSA HGRYLCSSKV LDNNQLVSVL SERYPSLPIP KRFKELDRPS
301: YDFNTLKLEG LGMKFKSIEE MFDDCVTFFN ERGLISSI

Best Arabidopsis Sequence Match ( AT4G35420.1 )
(BLAST)

001: MDQAKGKVCV TGASGFLASW LVKRLLLEGY EVIGTVRDPG NEKKLAHLWK LEGAKERLRL VKADLMEEGS FDNAIMGCQG VFHTASPVLK PTSNPEEEIL
101: RPAIEGTLNV LRSCRKNPSL KRVVLTSSSS TVRIRDDFDP KIPLDESIWT SVELCKRFQV WYALSKTLAE QAAWKFSEEN GIDLVTVLPS FLVGPSLPPD
201: LCSTASDVLG LLKGETEKFQ WHGQMGYVHI DDVARTHIVV FEHEAAQGRY ICSSNVISLE ELVSFLSARY PSLPIPKRFE KLNRLHYDFD TSKIQSLGLK
301: FKSLEEMFDD CIASLVEQGY LSTVLP

Arabidopsis Description

TKPR1Tetraketide alpha-pyrone reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q500U8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.