Factsheet for Solyc01g068080.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	97.81	97.81
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	74.69	74.69
KRH75363	Soybean	cytosol	72.81	73.04
Bra008822.1-P	Field mustard	cytosol	61.88	72.0
KRH49476	Soybean	cytosol	70.31	70.53
CDX69634	Canola	cytosol	70.62	70.41
CDY38590	Canola	cytosol	70.62	70.41
AT1G68540.1	Thale cress	cytosol	70.0	69.78
CDX96012	Canola	cytosol, nucleus, peroxisome	70.0	69.78
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	69.69	69.47
GSMUA_Achr6P09630_001	Banana	cytosol	64.69	64.69
CDY42105	Canola	cytosol, plastid	63.44	63.24
CDX84989	Canola	cytosol	62.81	62.62
AT1G25460.1	Thale cress	cytosol, plastid	62.19	62.38
EES02561	Sorghum	cytosol	61.25	60.31
CDX84988	Canola	cytosol	56.88	59.67
TraesCS3B01G036600.1	Wheat	cytosol	60.62	58.97
TraesCS3D01G033300.1	Wheat	cytosol	60.31	58.66
TraesCS3A01G046700.1	Wheat	cytosol	59.69	58.05
Bra024747.1-P	Field mustard	extracellular	42.81	58.05
CDY42108	Canola	cytosol	41.56	56.6
Bra024744.1-P	Field mustard	cytosol	63.44	55.92
Os01t0127500-01	Rice	cytosol	57.81	54.9
HORVU3Hr1G004270.1	Barley	mitochondrion	37.5	50.0
Solyc04g008780.2.1	Tomato	cytosol	47.81	45.27
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	43.75	42.17
Solyc01g008540.2.1	Tomato	endoplasmic reticulum	41.25	40.87
Solyc01g008530.2.1	Tomato	endoplasmic reticulum	41.88	40.85
Solyc01g008550.2.1	Tomato	extracellular, nucleus	40.31	40.31
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	41.25	39.76
Solyc01g087640.2.1	Tomato	cytosol	37.81	36.89
Solyc11g072510.1.1	Tomato	cytosol, extracellular	35.62	35.19
Solyc01g102730.2.1	Tomato	cytosol, peroxisome, plastid	32.5	31.9

Protein Annotations

EnsemblPlants:Solyc01g068080.2.1	EnsemblPlantsGene:Solyc01g068080.2	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002763377	UniProt:K4AX56	MapMan:21.8.1.5	:

Description

No Description!

Coordinates

chr1:-:77121171..77124462

Molecular Weight (calculated)

35695.8 Da

IEP (calculated)

6.102

GRAVY (calculated)

-0.193

Length

320 amino acids

Sequence
(BLAST)

001: MPEYCVTGGT GFIAAYLIKA LLLKGHIVRT TVRDPDNAEK VGFLWELEGA KERLKILKAD LLVEGSFDDA IEGVDGVFHT ASPVLVPYDD NIQKTLIDPC
101: VNGTLNVLNS CKKSSTLKRL VLTSSCSSIR YREDAQQISP LNESHWSDLQ YCQKYNLWYA YAKTKAEKEA WRVAEEFGID LVVVNPSFVV GPLLAPQPTS
201: TLQIILGTVK GVIGEYANRR LGFVHIEDVV GAHILVMEEQ KASGRYICSN SVRHMSQIND LLRTKYPSYP HENKCGNQQG EDIPHSLDTS KITQLGLPPL
301: KSLNEMFDDC IQSFQEKGFL

Best Arabidopsis Sequence Match ( AT1G68540.1 )
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.