Factsheet for VIT_01s0011g03480.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 4
plastid 4
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75363	Soybean	cytosol	80.62	80.88
KRH49476	Soybean	cytosol	77.5	77.74
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	75.31	75.31
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	74.69	74.69
Bra008822.1-P	Field mustard	cytosol	63.44	73.82
CDX69634	Canola	cytosol	73.12	72.9
AT1G68540.1	Thale cress	cytosol	72.81	72.59
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	72.81	72.59
CDX96012	Canola	cytosol, nucleus, peroxisome	72.5	72.27
CDY38590	Canola	cytosol	72.5	72.27
GSMUA_Achr6P09630_001	Banana	cytosol	70.94	70.94
CDY42105	Canola	cytosol, plastid	64.69	64.49
AT1G25460.1	Thale cress	cytosol, plastid	64.06	64.26
CDX84989	Canola	cytosol	64.38	64.17
EES02561	Sorghum	cytosol	62.81	61.85
TraesCS3B01G036600.1	Wheat	cytosol	61.56	59.88
TraesCS3A01G046700.1	Wheat	cytosol	60.62	58.97
TraesCS3D01G033300.1	Wheat	cytosol	60.62	58.97
Bra024747.1-P	Field mustard	extracellular	42.81	58.05
CDX84988	Canola	cytosol	55.31	58.03
Os01t0127500-01	Rice	cytosol	60.62	57.57
CDY42108	Canola	cytosol	42.19	57.45
Bra024744.1-P	Field mustard	cytosol	64.69	57.02
HORVU3Hr1G004270.1	Barley	mitochondrion	40.94	54.58
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	47.81	47.37
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	31.88	47.22
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	44.06	43.65
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	44.38	43.56
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	44.38	43.56
VIT_13s0047g00940.t01	Wine grape	cytosol	43.75	43.34
VIT_13s0101g00240.t01	Wine grape	cytosol	34.69	43.02
VIT_13s0101g00250.t01	Wine grape	cytosol	37.5	42.7
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	43.12	42.2
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	42.19	41.93
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	42.5	41.72
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	32.5	41.43
VIT_03s0110g00350.t01	Wine grape	cytosol	41.56	41.05
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	41.25	40.99
VIT_09s0070g00240.t01	Wine grape	cytosol	42.81	40.53
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	41.25	40.37
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	42.19	39.13
VIT_13s0067g00680.t01	Wine grape	cytosol	32.81	37.91
VIT_13s0067g00690.t01	Wine grape	cytosol	35.94	37.22
VIT_06s0004g07130.t01	Wine grape	cytosol	37.19	36.17
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	38.44	35.65
VIT_12s0035g02070.t01	Wine grape	cytosol	31.88	30.63
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	43.75	22.95

Protein Annotations

EntrezGene:100257863	wikigene:100257863	MapMan:21.8.1.5	Gene3D:3.40.50.720	ProteinID:CBI27024	ProteinID:CBI27024.3
UniProt:D7T953	InterPro:Epimerase_deHydtase	EMBL:FN595752	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	EntrezGene:LOC100257863	wikigene:LOC100257863	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366
PANTHER:PTHR10366:SF503	SUPFAM:SSF51735	TIGR:TC69942	UniParc:UPI00015C7E36	ArrayExpress:VIT_01s0011g03480	EnsemblPlantsGene:VIT_01s0011g03480
EnsemblPlants:VIT_01s0011g03480.t01	unigene:Vvi.1894	RefSeq:XP_002282497	RefSeq:XP_002282497.1	SEG:seg	:

Description

No Description!

Coordinates

chr1:-:3147476..3149151

Molecular Weight (calculated)

35484.5 Da

IEP (calculated)

6.042

GRAVY (calculated)

-0.093

Length

320 amino acids

Sequence
(BLAST)

001: MANFCVTGGT GFIAAYLVKR LLEDGHFVRT TVRDPGDVEK VGFLWELSGA KERLKIMKAD LMVEESFDEA VQGVDGVFHT ASPVLVPYDE NIKATLIDPC
101: INGTLNVLRS CSKSSSLKRV VLTSSCSSIR YRDDVQQVSP LNESHWSDPE YCKRYNLWYA YAKTEAEKEA WKLAKENGID LVAVNPSFVV GPLLAWQPTS
201: TLHMILSVVK GLCGEYPNTT VGFVHIDDVI AAHILAMEES KASGRLVCSS SVAHWSQIID MLRAKYPAYP FESKCSSSEG DNHPHSMDTS KIIQLGLPPF
301: KTLAQMFDDC IKSFQDKGFL

Best Arabidopsis Sequence Match ( AT1G68540.1 )
(BLAST)

001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L

Arabidopsis Description

TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.