Factsheet for VIT_13s0064g00290.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 2
plastid 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	64.81	64.22
VIT_13s0047g00940.t01	Wine grape	cytosol	92.59	61.92
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	92.13	61.61
VIT_13s0067g00680.t01	Wine grape	cytosol	75.93	59.21
VIT_13s0101g00250.t01	Wine grape	cytosol	75.46	58.01
VIT_13s0101g00240.t01	Wine grape	cytosol	62.5	52.33
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	76.85	50.92
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	76.85	50.92
VIT_03s0110g00350.t01	Wine grape	cytosol	75.93	50.62
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	75.0	49.69
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	76.85	48.12
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	71.3	47.83
GSMUA_Achr8P24070_001	Banana	golgi, plastid	69.91	46.75
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	69.44	46.58
GSMUA_Achr8P24060_001	Banana	plastid	69.44	46.44
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	69.44	45.87
GSMUA_Achr8P24040_001	Banana	plastid	67.59	45.2
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	68.06	44.95
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	67.59	44.51
TraesCS4A01G331900.2	Wheat	golgi, unclear	67.13	43.94
TraesCS5D01G540800.1	Wheat	plastid	66.2	43.33
TraesCS5B01G547200.1	Wheat	unclear	66.2	43.33
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	67.13	43.15
TraesCS5D01G541100.1	Wheat	golgi	65.74	43.03
TraesCS5B01G547000.1	Wheat	golgi	65.28	42.73
VIT_13s0067g00690.t01	Wine grape	cytosol	61.11	42.72
KXG30065	Sorghum	plastid	64.35	41.62
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	66.2	41.45
TraesCS4D01G343400.1	Wheat	cytosol	63.43	40.41
HORVU5Hr1G122150.1	Barley	plastid	67.13	40.28
TraesCS5A01G517000.1	Wheat	mitochondrion	63.43	37.95
HORVU4Hr1G085100.1	Barley	cytosol	63.89	37.1
Zm00001d015956_P002	Maize	plastid	65.28	36.81
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	51.85	34.67
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	35.19	33.63
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	92.13	32.62
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	47.22	31.88
VIT_09s0070g00240.t01	Wine grape	cytosol	48.61	31.07
VIT_06s0004g07130.t01	Wine grape	cytosol	46.76	30.7
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	32.41	27.89
VIT_12s0035g02070.t01	Wine grape	cytosol	38.89	25.23

Protein Annotations

ArrayExpress:VIT_13s0064g00290	EMBL:FN595509	EnsemblPlants:VIT_13s0064g00290.t01	EnsemblPlantsGene:VIT_13s0064g00290	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366
PANTHER:PTHR10366:SF407	PFAM:PF01370	ProteinID:CCB49537	ProteinID:CCB49537.1	SUPFAM:SSF51735	UniParc:UPI0002107EF8
UniProt:F6HBD5	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr13:-:21804003..21821531

Molecular Weight (calculated)

23489.4 Da

IEP (calculated)

6.669

GRAVY (calculated)

0.048

Length

216 amino acids

Sequence
(BLAST)

001: MSEQGKLVCV TGASGYTASW LVKLLLQRGY TVKATVRDPN YPKKTEHLLA LEGATERLHL FKANLLEEGS FESVVDGCDA VFHTASPVVL IVDNPQAQLI
101: DPALKGTMNV LRSCAKVPSV KRVAVTSSMA SVAFNGKPLA PYVLVDESWL SDPVFCEKSK TLAEEAAWKF AKENGIDMVT IHPGWVIGPL LQPTLNLSVE
201: EVLKLLKGDT FPNNTH

Best Arabidopsis Sequence Match ( AT1G09480.2 )
(BLAST)

001: MNGGGKLVCV TGASGYIASW IVKLLLLRGY TVKATVRDLT DRKKTEHLLA LDGAKERLKL FKADLLEESS FEQAIEGCDA VFHTASPVFF TVKDPQTELI
101: DPALKGTMNV LNTCKETPSV RRVILTSSTA AVLFRQPPVE ASDVVDETFF SDPSLCRETK NWYPLSKILA ENAAWEFAKD NGIDMVVLNP GFIFGPLLQP
201: TLNFSVELIV DFINGKNPFN SRFYRFVDVR DVALAHIKAL ETPSANGRYI IDGPIMSVSD IIDILRELLP DLCIADTNEE SVMNEMLCKV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.