Factsheet for VIT_13s0047g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	98.45	98.45
VIT_13s0101g00240.t01	Wine grape	cytosol	76.16	95.35
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	61.92	92.59
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	79.26	78.53
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	77.09	76.38
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	77.09	76.38
VIT_03s0110g00350.t01	Wine grape	cytosol	76.16	75.93
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	78.02	73.04
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	72.14	72.36
VIT_13s0101g00250.t01	Wine grape	cytosol	61.61	70.82
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	70.59	69.72
VIT_13s0067g00690.t01	Wine grape	cytosol	66.56	69.58
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	69.35	69.57
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	46.75	69.27
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	69.97	69.11
GSMUA_Achr8P24070_001	Banana	golgi, plastid	69.04	69.04
GSMUA_Achr8P24060_001	Banana	plastid	68.73	68.73
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	69.35	68.29
VIT_13s0067g00680.t01	Wine grape	cytosol	58.51	68.23
GSMUA_Achr8P24040_001	Banana	plastid	68.11	68.11
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	71.83	67.25
TraesCS4A01G331900.2	Wheat	golgi, unclear	65.02	63.64
KXG30065	Sorghum	plastid	65.33	63.17
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	65.63	63.1
TraesCS5D01G540800.1	Wheat	plastid	64.4	63.03
TraesCS5B01G547200.1	Wheat	unclear	64.4	63.03
TraesCS5D01G541100.1	Wheat	golgi	64.09	62.73
TraesCS5B01G547000.1	Wheat	golgi	64.09	62.73
TraesCS4D01G343400.1	Wheat	cytosol	60.99	58.11
HORVU5Hr1G122150.1	Barley	plastid	64.4	57.78
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	39.01	55.75
Zm00001d015956_P002	Maize	plastid	65.63	55.35
HORVU4Hr1G085100.1	Barley	cytosol	62.85	54.57
TraesCS5A01G517000.1	Wheat	mitochondrion	60.37	54.02
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	97.83	51.8
VIT_09s0070g00240.t01	Wine grape	cytosol	48.3	46.15
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	46.13	46.13
VIT_06s0004g07130.t01	Wine grape	cytosol	46.13	45.29
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	43.34	43.75
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	30.34	39.04
VIT_12s0035g02070.t01	Wine grape	cytosol	37.46	36.34

Protein Annotations

EntrezGene:100267168	wikigene:100267168	EntrezGene:100855275	wikigene:100855275	Gene3D:3.40.50.720	MapMan:35.1
ProteinID:CBI29103	ProteinID:CBI29103.3	UniProt:D7TF68	InterPro:Epimerase_deHydtase	EMBL:FN595767	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	EntrezGene:LOC100267168	wikigene:LOC100267168	EntrezGene:LOC100855275
wikigene:LOC100855275	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407	SUPFAM:SSF51735
UniParc:UPI0001BE31DB	ArrayExpress:VIT_13s0047g00940	EnsemblPlantsGene:VIT_13s0047g00940	EnsemblPlants:VIT_13s0047g00940.t01	RefSeq:XP_003633503	RefSeq:XP_003633503.1
RefSeq:XP_003633515	RefSeq:XP_003633515.1	RefSeq:XP_003633516	RefSeq:XP_003633516.1	:	:

Description

No Description!

Coordinates

chr13:+:17662275..17673534

Molecular Weight (calculated)

35645.3 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.033

Length

323 amino acids

Sequence
(BLAST)

001: MDGQGKVVCV TGASGYIASW LVKLLLQRGY TVKATVRDPN DPKKTEHLLA LEGAKERLHL FKANLLEEGS FDSVVDGCDG VFHTASPVVL IVDDPQAQLI
101: DPALKGTMSV LGSCAKVPSV KRVVVTSSMA SVAFNGKPLA PDVLVDESWF SDPVFCEKSK LWYMLSKTLA EEAAWKFAKE NGIDMVTINP GWVIGPLLQP
201: TLNLSVEEVL KLLKGDTFPN KTHRWVDVRD VAMAHIQAYE LPTARGRYCL VGSILHCSET MKILRKLYPA LNLPEKCADD KPYEPAYMVS QEKTKSLGID
301: FTPLEVSLKD TVESLREKNF VSF

Best Arabidopsis Sequence Match ( AT5G19440.1 )
(BLAST)

001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLEGAKERL HLFKADLLEQ GSFDSAIDGC HGVFHTASPF FNDAKDPQAE
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF

Arabidopsis Description

At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.