Factsheet for VIT_15s0107g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	82.32	87.12
VIT_13s0101g00250.t01	Wine grape	cytosol	64.06	78.65
VIT_13s0047g00940.t01	Wine grape	cytosol	73.04	78.02
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	48.12	76.85
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	71.88	76.78
VIT_13s0101g00240.t01	Wine grape	cytosol	57.1	76.36
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	71.3	75.46
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	71.3	75.46
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	72.17	72.17
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	66.09	70.81
VIT_03s0110g00350.t01	Wine grape	cytosol	66.38	70.68
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	65.51	70.19
VIT_13s0067g00690.t01	Wine grape	cytosol	61.45	68.61
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	63.77	67.28
GSMUA_Achr8P24070_001	Banana	golgi, plastid	61.45	65.63
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	62.03	65.44
GSMUA_Achr8P24060_001	Banana	plastid	61.16	65.33
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	41.16	65.14
GSMUA_Achr8P24040_001	Banana	plastid	60.29	64.4
VIT_13s0067g00680.t01	Wine grape	cytosol	51.01	63.54
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	59.42	62.5
TraesCS4A01G331900.2	Wheat	golgi, unclear	58.26	60.91
KXG30065	Sorghum	plastid	58.84	60.78
TraesCS5D01G540800.1	Wheat	plastid	57.68	60.3
TraesCS5B01G547200.1	Wheat	unclear	57.39	60.0
TraesCS5B01G547000.1	Wheat	golgi	57.39	60.0
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	58.26	59.82
TraesCS5D01G541100.1	Wheat	golgi	57.1	59.7
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	36.81	56.19
TraesCS4D01G343400.1	Wheat	cytosol	54.78	55.75
HORVU5Hr1G122150.1	Barley	plastid	57.39	55.0
Zm00001d015956_P002	Maize	plastid	58.26	52.48
HORVU4Hr1G085100.1	Barley	cytosol	55.65	51.61
TraesCS5A01G517000.1	Wheat	mitochondrion	53.62	51.25
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	41.16	43.96
VIT_06s0004g07130.t01	Wine grape	cytosol	41.16	43.16
VIT_09s0070g00240.t01	Wine grape	cytosol	41.74	42.6
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	39.13	42.19
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	73.04	41.31
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	27.54	37.85
VIT_12s0035g02070.t01	Wine grape	cytosol	34.2	35.44

Protein Annotations

EntrezGene:100260317	wikigene:100260317	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CBI38203	ProteinID:CBI38203.3
UniProt:D7U634	InterPro:Epimerase_deHydtase	EMBL:FN596514	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	EntrezGene:LOC100260317	wikigene:LOC100260317	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366
PANTHER:PTHR10366:SF492	SUPFAM:SSF51735	TIGR:TC52853	UniParc:UPI00015CC9BD	ArrayExpress:VIT_15s0107g00210	EnsemblPlantsGene:VIT_15s0107g00210
EnsemblPlants:VIT_15s0107g00210.t01	unigene:Vvi.1183	RefSeq:XP_002263333	RefSeq:XP_002263333.1	RefSeq:XP_010661299.2	SEG:seg

Description

No Description!

Coordinates

chr15:-:8300495..8303378

Molecular Weight (calculated)

37911.8 Da

IEP (calculated)

6.619

GRAVY (calculated)

0.015

Length

345 amino acids

Sequence
(BLAST)

001: MSSGGGKVVC VTGASGLIAS WLVKLLLQND YTVKATVRDP NDPKRTQHLL SLDGAKERLH LFKADLLEEG SFNSVVDGCD GVFHTASPVA MDVINPQAEL
101: IDPALKGIIN VLRSCAKVPS VKRVVVTSSM TSVVFTGKPL TSEVLINESW FSDPVLCNES KLWYVLSKTL AEEAAWKFSK ENGIDMVTIN PGGVIGPLLQ
201: PTLNLSAELF LNLINGAQTF PNRSYRLVDV RDVANAHIQA YEIPEASGRY CLVERDLHCS ETLKILRKLY PDLPLPEKCA DDKPYAPSFL VSQEKANSLG
301: AHFTPLEVSL KDTVESLRRR TLSVSDSWNL LLAMQINHKL MVFSC

Best Arabidopsis Sequence Match ( AT1G09480.2 )
(BLAST)

001: MNGGGKLVCV TGASGYIASW IVKLLLLRGY TVKATVRDLT DRKKTEHLLA LDGAKERLKL FKADLLEESS FEQAIEGCDA VFHTASPVFF TVKDPQTELI
101: DPALKGTMNV LNTCKETPSV RRVILTSSTA AVLFRQPPVE ASDVVDETFF SDPSLCRETK NWYPLSKILA ENAAWEFAKD NGIDMVVLNP GFIFGPLLQP
201: TLNFSVELIV DFINGKNPFN SRFYRFVDVR DVALAHIKAL ETPSANGRYI IDGPIMSVSD IIDILRELLP DLCIADTNEE SVMNEMLCKV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.