Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 3
- golgi 4
- extracellular 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 88.69 | 88.69 |
| VIT_03s0110g00350.t01 | Wine grape | cytosol | 71.56 | 72.22 |
| VIT_13s0047g00540.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 69.42 | 70.28 |
| VIT_13s0047g00940.t01 | Wine grape | cytosol | 69.11 | 69.97 |
| VIT_06s0004g02380.t01 | Wine grape | endoplasmic reticulum, golgi, plastid | 68.81 | 69.88 |
| VIT_06s0004g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 67.58 | 68.63 |
| VIT_13s0101g00240.t01 | Wine grape | cytosol | 54.13 | 68.6 |
| VIT_13s0067g00530.t01 | Wine grape | endoplasmic reticulum | 68.2 | 68.4 |
| VIT_13s0067g00460.t01 | Wine grape | endoplasmic reticulum | 68.2 | 68.4 |
| VIT_13s0064g00290.t01 | Wine grape | cytosol, extracellular, plastid | 44.95 | 68.06 |
| VIT_13s0064g00270.t01 | Wine grape | cytosol, endoplasmic reticulum | 67.28 | 67.48 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 44.04 | 66.06 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 64.53 | 65.33 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 64.53 | 65.33 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 63.61 | 64.4 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 63.3 | 63.11 |
| VIT_13s0101g00250.t01 | Wine grape | cytosol | 53.52 | 62.28 |
| VIT_15s0107g00210.t01 | Wine grape | extracellular, plastid | 65.44 | 62.03 |
| VIT_13s0067g00690.t01 | Wine grape | cytosol | 58.41 | 61.81 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 62.08 | 61.52 |
| TraesCS5B01G547000.1 | Wheat | golgi | 61.77 | 61.21 |
| Solyc01g087640.2.1 | Tomato | cytosol | 61.16 | 60.98 |
| TraesCS5D01G540800.1 | Wheat | plastid | 61.47 | 60.91 |
| KXG30065 | Sorghum | plastid | 62.08 | 60.78 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 61.77 | 60.12 |
| TraesCS5B01G547200.1 | Wheat | unclear | 60.55 | 60.0 |
| VIT_13s0067g00680.t01 | Wine grape | cytosol | 50.76 | 59.93 |
| TraesCS5D01G541100.1 | Wheat | golgi | 60.24 | 59.7 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 55.96 | 57.37 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 55.96 | 56.83 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 58.72 | 56.64 |
| CDX94965 | Canola | golgi | 55.96 | 56.31 |
| Bra020021.1-P | Field mustard | golgi | 55.05 | 55.9 |
| HORVU5Hr1G122150.1 | Barley | plastid | 61.47 | 55.83 |
| VIT_13s0047g00550.t01 | Wine grape | mitochondrion, vacuole | 58.72 | 55.65 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 54.74 | 55.59 |
| CDY68009 | Canola | cytosol, endoplasmic reticulum, golgi | 54.74 | 55.59 |
| Bra031666.1-P | Field mustard | golgi | 53.52 | 55.38 |
| AT1G09490.1 | Thale cress | golgi | 54.13 | 54.97 |
| Bra020020.1-P | Field mustard | extracellular, golgi | 54.13 | 54.97 |
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 54.43 | 54.94 |
| Bra020019.1-P | Field mustard | extracellular, golgi | 54.74 | 54.91 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 37.92 | 54.87 |
| CDY72415 | Canola | cytosol, endoplasmic reticulum, peroxisome | 53.52 | 53.85 |
| CDX94967 | Canola | plasma membrane | 52.91 | 53.73 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 58.72 | 53.19 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 60.24 | 52.96 |
| Bra038342.1-P | Field mustard | cytosol, golgi, peroxisome | 52.6 | 52.92 |
| CDY45844 | Canola | cytosol, golgi, peroxisome | 52.6 | 52.92 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 52.6 | 52.76 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 51.68 | 52.0 |
| Zm00001d015956_P002 | Maize | plastid | 60.55 | 51.7 |
| AT1G09480.1 | Thale cress | cytosol | 55.05 | 48.78 |
| CDY64748 | Canola | cytosol | 55.35 | 48.4 |
| VIT_06s0004g07130.t01 | Wine grape | cytosol | 45.57 | 45.29 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 45.57 | 44.08 |
| VIT_03s0038g04220.t01 | Wine grape | endoplasmic reticulum | 42.2 | 42.72 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 40.37 | 41.25 |
| VIT_03s0038g04230.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 29.66 | 38.65 |
| VIT_13s0047g00990.t01 | Wine grape | endoplasmic reticulum | 68.5 | 36.72 |
| VIT_12s0035g02070.t01 | Wine grape | cytosol | 36.39 | 35.74 |
Protein Annotations
| EntrezGene:100257572 | wikigene:100257572 | Gene3D:3.40.50.720 | MapMan:35.1 | ProteinID:CCB62578 | ProteinID:CCB62578.1 |
| InterPro:Epimerase_deHydtase | UniProt:F6I6L0 | EMBL:FN596756 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | EntrezGene:LOC100257572 | wikigene:LOC100257572 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF01370 | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF407 | SUPFAM:SSF51735 | TIGR:TC54722 | UniParc:UPI000210AB76 | ArrayExpress:VIT_13s0067g00620 | EnsemblPlantsGene:VIT_13s0067g00620 |
| EnsemblPlants:VIT_13s0067g00620.t01 | unigene:Vvi.3397 | RefSeq:XP_003634871 | RefSeq:XP_003634871.1 | RefSeq:XP_003634871.2 | : |
Description
No Description!
Coordinates
chr13_random:-:326924..347822
Molecular Weight (calculated)
36280.1 Da
IEP (calculated)
5.888
GRAVY (calculated)
0.085
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVAVAEKVV CVTGGAGYIA SWLVKLLLLR GYTVKATLRN PDDPKKTEHL LALKGAKERL HLFKADLLEE GSFDSIVEGC EGVFHTASPV LLEVTDPKVE
101: LIDPAVKGTL NVLRSCAKVP AIRRVVVTSS IVAVIYNGKP LTSDVIVDET WFSDPAFCEE SKLWYVLSKT LAEEAAWKFA KEHGIDLVTM NPGVMIGPPL
201: QPTINLTMEI ILNMINEVPY TFPSSTYKWV DVRDVANAHI QAFEISSASG RYCMVERITY RSEAIKILHE LYPAIHLPQK SADDEPLGPT YQISKEKVKS
301: LAIDFIPLEV SLKDTIESLK EKNFIHL
101: LIDPAVKGTL NVLRSCAKVP AIRRVVVTSS IVAVIYNGKP LTSDVIVDET WFSDPAFCEE SKLWYVLSKT LAEEAAWKFA KEHGIDLVTM NPGVMIGPPL
201: QPTINLTMEI ILNMINEVPY TFPSSTYKWV DVRDVANAHI QAFEISSASG RYCMVERITY RSEAIKILHE LYPAIHLPQK SADDEPLGPT YQISKEKVKS
301: LAIDFIPLEV SLKDTIESLK EKNFIHL
001: MNCGGKVVCV TGASGYIASW IVKLLLLRGY TVNATVRDPK DKKKTEHLLA LDGAKERLKL FKADLLEESS FDQAIDGCDA VFHTASPVLF TVTDPQTELI
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
Arabidopsis Description
At1g09490/F14J9_15 [Source:UniProtKB/TrEMBL;Acc:O80532]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.