Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 72.36 | 71.69 |
| AT1G09490.1 | Thale cress | golgi | 70.19 | 70.19 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 67.08 | 67.71 |
| AT1G09480.1 | Thale cress | cytosol | 68.63 | 59.89 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 40.06 | 59.17 |
| AT5G19440.1 | Thale cress | plastid | 58.07 | 57.36 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 56.52 | 56.0 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 56.83 | 55.96 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 56.83 | 55.96 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 55.59 | 55.42 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 54.97 | 54.8 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 55.28 | 54.27 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 53.73 | 53.56 |
| Solyc01g087640.2.1 | Tomato | cytosol | 53.73 | 52.74 |
| TraesCS5B01G547200.1 | Wheat | unclear | 54.04 | 52.73 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 53.73 | 52.42 |
| TraesCS5D01G540800.1 | Wheat | plastid | 53.73 | 52.42 |
| KXG30065 | Sorghum | plastid | 54.35 | 52.4 |
| TraesCS5D01G541100.1 | Wheat | golgi | 53.42 | 52.12 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 54.35 | 52.08 |
| TraesCS5B01G547000.1 | Wheat | golgi | 52.8 | 51.52 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 51.86 | 49.26 |
| HORVU5Hr1G122150.1 | Barley | plastid | 54.97 | 49.17 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 52.8 | 47.09 |
| Zm00001d015956_P002 | Maize | plastid | 54.66 | 45.95 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 46.89 | 45.48 |
| AT1G15950.1 | Thale cress | cytosol | 47.52 | 44.48 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 31.06 | 44.25 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 50.93 | 44.09 |
| AT4G35420.1 | Thale cress | extracellular | 43.79 | 43.25 |
| AT5G58490.1 | Thale cress | cytosol | 42.24 | 41.98 |
| AT1G68540.1 | Thale cress | cytosol | 40.68 | 40.81 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 37.27 | 37.62 |
| AT2G02400.1 | Thale cress | cytosol | 36.34 | 36.79 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:837476 | ProteinID:AEE28455.1 | ArrayExpress:AT1G09510 | EnsemblPlantsGene:AT1G09510 |
| RefSeq:AT1G09510 | TAIR:AT1G09510 | RefSeq:AT1G09510-TAIR-G | EnsemblPlants:AT1G09510.1 | TAIR:AT1G09510.1 | Unigene:At.71269 |
| EMBL:BT020240 | EMBL:BT020558 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004022 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0050662 | GO:GO:0055114 |
| InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_172422.2 | PFAM:PF01370 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF492 |
| UniProt:Q5PP57 | SUPFAM:SSF51735 | UniParc:UPI000034F4BC | : | : | : |
Description
At1g09510 [Source:UniProtKB/TrEMBL;Acc:Q5PP57]
Coordinates
chr1:+:3069357..3070910
Molecular Weight (calculated)
35316.0 Da
IEP (calculated)
5.151
GRAVY (calculated)
0.124
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGGKMVCV TGASGYVASW IVKLLLLRGY TVRATVRDPS DEKKTEHLLA LDGAKEKLKL FKADLLEEGS FEQAIEGCDA VFHTASPVSL TVTDPQIELI
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
101: DPAVKGTLNV LKTCAKVSSV KRVIVTSSMA AVLFREPTLG PNDLVDESCF SDPNFCTEKK LWYALSKTLA EDEAWRFAKE KGLDLVVINP GLVLGPLLKP
201: SLTFSVNVIV ELITGKDNFI NKDFRLVDVR DVALAHIKAF ETPSANGRYI IEGPVVTIND IEKILREFFP DLNLGNKGEA SEIIPVIYKL CVEKVKSLGI
301: EFTPTEATLR DTILSLKEKC LV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.