Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64747 | Canola | extracellular, golgi, mitochondrion, plastid | 78.88 | 78.4 |
| CDX94966 | Canola | golgi, mitochondrion, peroxisome, plastid | 78.26 | 78.26 |
| Bra020021.1-P | Field mustard | golgi | 77.95 | 77.95 |
| Bra020019.1-P | Field mustard | extracellular, golgi | 78.88 | 77.91 |
| Bra020020.1-P | Field mustard | extracellular, golgi | 77.64 | 77.64 |
| CDX94965 | Canola | golgi | 78.26 | 77.54 |
| AT1G09480.1 | Thale cress | cytosol | 88.51 | 77.24 |
| CDX94967 | Canola | plasma membrane | 75.16 | 75.16 |
| CDX94968 | Canola | endoplasmic reticulum, golgi, plastid | 76.09 | 75.15 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 71.12 | 70.46 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 70.19 | 70.19 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 68.94 | 69.59 |
| CDY64748 | Canola | cytosol | 78.57 | 67.65 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 41.61 | 61.47 |
| Solyc01g087640.2.1 | Tomato | cytosol | 56.52 | 55.49 |
| AT5G19440.1 | Thale cress | plastid | 55.59 | 54.91 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 54.66 | 54.15 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 54.97 | 54.13 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 53.73 | 53.56 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 54.35 | 53.52 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 52.8 | 52.63 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 53.42 | 52.44 |
| TraesCS5D01G540800.1 | Wheat | plastid | 53.42 | 52.12 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 53.42 | 52.12 |
| TraesCS5B01G547200.1 | Wheat | unclear | 53.11 | 51.82 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 51.55 | 51.39 |
| TraesCS5D01G541100.1 | Wheat | golgi | 52.48 | 51.21 |
| TraesCS5B01G547000.1 | Wheat | golgi | 52.48 | 51.21 |
| KXG30065 | Sorghum | plastid | 53.11 | 51.2 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 52.8 | 50.6 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 52.17 | 49.56 |
| HORVU5Hr1G122150.1 | Barley | plastid | 54.35 | 48.61 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 53.11 | 47.37 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 52.17 | 45.16 |
| Zm00001d015956_P002 | Maize | plastid | 53.11 | 44.65 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 45.03 | 43.67 |
| AT1G15950.1 | Thale cress | cytosol | 46.58 | 43.6 |
| AT4G35420.1 | Thale cress | extracellular | 43.48 | 42.94 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 29.81 | 42.48 |
| AT5G58490.1 | Thale cress | cytosol | 39.13 | 38.89 |
| AT1G68540.1 | Thale cress | cytosol | 36.96 | 37.07 |
| AT2G02400.1 | Thale cress | cytosol | 35.09 | 35.53 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 34.16 | 34.48 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:837474 | UniProt:A0A178WBP0 | ProteinID:AAC33209.1 | ProteinID:AEE28450.1 |
| ArrayExpress:AT1G09490 | EnsemblPlantsGene:AT1G09490 | RefSeq:AT1G09490 | TAIR:AT1G09490 | RefSeq:AT1G09490-TAIR-G | EnsemblPlants:AT1G09490.1 |
| TAIR:AT1G09490.1 | EMBL:AY087161 | EMBL:AY090369 | EMBL:AY122900 | InterPro:Epimerase_deHydtase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004022 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0050662 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_172420.1 | UniProt:O80532 | ProteinID:OAP15514.1 | PFAM:PF01370 |
| PO:PO:0000293 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF492 | SUPFAM:SSF51735 | UniParc:UPI00000A1666 | : |
Description
At1g09490/F14J9_15 [Source:UniProtKB/TrEMBL;Acc:O80532]
Coordinates
chr1:+:3063936..3065949
Molecular Weight (calculated)
35624.2 Da
IEP (calculated)
5.483
GRAVY (calculated)
-0.016
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MNCGGKVVCV TGASGYIASW IVKLLLLRGY TVNATVRDPK DKKKTEHLLA LDGAKERLKL FKADLLEESS FDQAIDGCDA VFHTASPVLF TVTDPQTELI
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
101: DPALKGTINV LNTCKQVSSV KRVILTSSTA AVLSRQPPIG PNDLVDETFF SDPSLCRETK NWYSLSKILA ENAAWQFAKD NGIDMVVLNP GFICGPLLQP
201: TLNMSVELIV DFINGKNPFN KRYYRFSDVR DVALVHIKAL ETPSANGRYI IDGPNMSVND IIDILRKLFP DLSIADTNEE SEMNEMICQV CVEKVKNLGV
301: EFTPMKSSLR DTIVSLKEKC LL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.