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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, golgi, plastid

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • mitochondrion 2
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, peroxisome, plastid
Any Predictor:cytosol, golgi, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:golgi
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 86.02 85.49
CDX94965 Canola golgi 83.85 83.08
CDY64748 Canola cytosol 95.65 82.35
CDX94967 Canola plasma membrane 81.99 81.99
CDX94968 Canola endoplasmic reticulum, golgi, plastid 80.12 79.14
AT1G09490.1 Thale cress golgi 78.26 78.26
AT1G09480.1 Thale cress cytosol 79.5 69.38
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 68.94 68.94
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 67.39 66.77
CDY45844 Canola cytosol, golgi, peroxisome 66.15 65.54
TraesCS4A01G331600.1 Wheat cytosol, golgi, plastid 41.3 61.01
CDY14000 Canola cytosol 58.07 57.36
CDX92530 Canola cytosol 57.14 55.76
GSMUA_Achr8P24070_001 Banana golgi, plastid 55.59 55.42
GSMUA_Achr8P24060_001 Banana plastid 55.28 55.11
VIT_13s0067g00620.t01 Wine grape endoplasmic reticulum, golgi 55.59 54.74
GSMUA_Achr8P24040_001 Banana plastid 54.66 54.49
VIT_13s0067g00590.t01 Wine grape endoplasmic reticulum, golgi 55.28 54.43
Solyc01g087640.2.1 Tomato cytosol 55.28 54.27
CDY22576 Canola cytosol 54.66 54.15
TraesCS5D01G540800.1 Wheat plastid 55.28 53.94
TraesCS4A01G331900.2 Wheat golgi, unclear 55.28 53.94
CDY65726 Canola cytosol 54.35 53.85
CDY03618 Canola cytosol 54.35 53.85
CDY43911 Canola cytosol 53.73 53.23
GSMUA_Achr4P10200_001 Banana cytosol, golgi, plastid 54.04 53.05
TraesCS5B01G547000.1 Wheat golgi 54.04 52.73
TraesCS5B01G547200.1 Wheat unclear 54.04 52.73
Os01t0528800-01 Rice cytosol, endoplasmic reticulum, plastid 54.97 52.68
TraesCS5D01G541100.1 Wheat golgi 53.42 52.12
KXG30065 Sorghum plastid 54.04 52.1
TraesCS4D01G343400.1 Wheat cytosol 51.86 49.26
HORVU5Hr1G122150.1 Barley plastid 54.97 49.17
TraesCS5A01G517000.1 Wheat mitochondrion 52.17 46.54
CDY35052 Canola cytosol 39.75 46.38
TraesCS5B01G546700.1 Wheat peroxisome, plastid 32.3 46.02
Zm00001d015956_P002 Maize plastid 54.66 45.95
HORVU4Hr1G085100.1 Barley cytosol 52.8 45.7
CDX81743 Canola cytosol 45.65 43.24
CDY33365 Canola cytosol 45.96 43.15
CDY63972 Canola cytosol 44.1 42.9
CDY52857 Canola cytosol 45.65 42.86
CDX87345 Canola cytosol 44.1 42.77
CDY39941 Canola cytosol 44.1 42.77
CDY64860 Canola cytosol 43.48 42.3
CDY24810 Canola cytosol 39.75 40.38
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 40.06 39.94
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 40.06 39.94
CDX75502 Canola cytosol, extracellular, plastid 39.44 39.81
CDX69139 Canola cytosol, extracellular, plastid 38.82 39.19
CDY41656 Canola cytosol, plastid, vacuole 38.51 39.12
CDY38590 Canola cytosol 37.89 38.01
CDX69634 Canola cytosol 37.89 38.01
CDX96012 Canola cytosol, nucleus, peroxisome 37.27 37.38
CDY09372 Canola cytosol 36.65 36.76
CDY15830 Canola cytosol 35.09 35.2
CDY42105 Canola cytosol, plastid 34.16 34.27
CDX84989 Canola cytosol 34.16 34.27
CDX84988 Canola cytosol 30.43 32.13
CDY42108 Canola cytosol 19.88 27.23
Protein Annotations
EnsemblPlants:CDX94966EnsemblPlantsGene:GSBRNA2T00100455001Gene3D:3.40.50.720GO:A0A078E0J5GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF492
PFAM:PF01370ProteinID:CDX94966ProteinID:CDX94966.1SEG:segSUPFAM:SSF51735UniParc:UPI0004EDCAF6
MapMan:35.1:::::
Description
BnaC05g07050D
Coordinates
chrLK031886:-:454707..460710
Molecular Weight (calculated)
35831.4 Da
IEP (calculated)
4.736
GRAVY (calculated)
0.026
Length
322 amino acids
Sequence
(BLAST)
001: MNGGGKVACV TGASGYVASW IVKLLLLRGY TVRATVRNPT DTAKTEHLLA LDGADERLKL FKADLLEEYS FEQAIEGCEA VFHTASPVKF IVTDPQTELI
101: DPALKGTMNV LNTCKKTSSV KRVIVTSSMA AVIVRQPPLE PNDVVDESFF SDPSVCMETE YWYPLSKTLA ENVAWQFSKD NGMDMVFINP GFVIGPLLQP
201: TLNFSVEMIV DMINGKNPFN SIYYRFVDVR DVALAHVNAL ETPSANGRYI MDGPSMTIYE IKEIMRELFP DLCVADTKEE GEIKEIIYKV CVEKVKNLGV
301: EFTPLKSSLR DTIISLKEKC LV
Best Arabidopsis Sequence Match ( AT1G09480.1 )
(BLAST)
001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.