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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, plastid
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84989 Canola cytosol 97.82 97.82
Bra024744.1-P Field mustard cytosol 99.69 88.15
AT1G25460.1 Thale cress cytosol, plastid 82.87 83.39
CDY42108 Canola cytosol 60.44 82.55
CDX84988 Canola cytosol 77.88 81.97
CDX69634 Canola cytosol 70.41 70.41
CDY38590 Canola cytosol 70.41 70.41
CDX96012 Canola cytosol, nucleus, peroxisome 69.78 69.78
KRH75363 Soybean cytosol 65.11 65.52
VIT_01s0011g03480.t01 Wine grape cytosol, plastid 64.49 64.69
Solyc01g068080.2.1 Tomato cytosol, extracellular, plastid 63.24 63.44
PGSC0003DMT400013318 Potato cytosol, extracellular, plastid 62.62 62.81
KRH49476 Soybean cytosol 62.31 62.7
GSMUA_Achr6P09630_001 Banana cytosol 58.88 59.06
EES02561 Sorghum cytosol 58.26 57.54
TraesCS3A01G046700.1 Wheat cytosol 57.94 56.53
TraesCS3B01G036600.1 Wheat cytosol 57.63 56.23
TraesCS3D01G033300.1 Wheat cytosol 57.32 55.93
Os01t0127500-01 Rice cytosol 55.76 53.12
HORVU3Hr1G004270.1 Barley mitochondrion 38.94 52.08
CDY41656 Canola cytosol, plastid, vacuole 42.37 42.9
CDX75502 Canola cytosol, extracellular, plastid 42.37 42.63
CDX69139 Canola cytosol, extracellular, plastid 42.06 42.32
CDY24810 Canola cytosol 41.74 42.27
CDY35052 Canola cytosol 34.27 39.86
CDY22576 Canola cytosol 38.63 38.15
CDY14000 Canola cytosol 38.63 38.04
CDY43911 Canola cytosol 38.32 37.85
CDY03618 Canola cytosol 38.32 37.85
CDY65726 Canola cytosol 38.32 37.85
CDX92530 Canola cytosol 38.32 37.27
CDX81743 Canola cytosol 38.63 36.47
CDY52857 Canola cytosol 38.63 36.15
CDY33365 Canola cytosol 38.63 36.15
CDY39941 Canola cytosol 37.38 36.14
CDX87345 Canola cytosol 37.38 36.14
CDY63972 Canola cytosol 36.76 35.65
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 35.83 35.49
CDY64860 Canola cytosol 36.45 35.35
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 34.89 34.78
CDX94967 Canola plasma membrane 34.58 34.47
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 34.89 34.46
CDY45844 Canola cytosol, golgi, peroxisome 34.89 34.46
CDX94968 Canola endoplasmic reticulum, golgi, plastid 34.89 34.36
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 34.27 34.16
CDX94965 Canola golgi 34.58 34.15
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 33.64 33.44
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 33.33 33.13
CDY15830 Canola cytosol 30.53 30.53
CDY09372 Canola cytosol 30.53 30.53
CDY64748 Canola cytosol 35.51 30.48
Protein Annotations
EnsemblPlants:CDY42105EnsemblPlantsGene:GSBRNA2T00074273001Gene3D:3.40.50.720GO:A0A078HUD4GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF503
PFAM:PF01370ProteinID:CDY42105ProteinID:CDY42105.1SUPFAM:SSF51735UniParc:UPI0004EDD1D9UniProt:A0A078HUD4
MapMan:21.8.1.5:::::
Description
BnaA09g28550DBnaA09g28550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUD4]
Coordinates
chrLK032515:-:50807..52494
Molecular Weight (calculated)
35817.9 Da
IEP (calculated)
5.471
GRAVY (calculated)
-0.172
Length
321 amino acids
Sequence
(BLAST)
001: MGEYLVTGGT SFIASHVVKA LLDLGHSVRT TVRDSSDEEK VRFLWELKGA KERLKIFEAD LTVEGSFDEA VKGVDGVFHI ASRVTVCLDK NDLEKLVDRD
101: INGTRNLMNS CEKSRNTVKR IVLTSSSTAV RYRYDATDAS PLNESHYSDL DYCRNFKIWY GYAKTLGEKE AWTIAAEKNL DLVVVIPSFC IGPILSPEPT
201: SSPLILLSII KGVRGDYPNV TGGFVHIEDV VAAQILAMEE PKASGRFICS SSVAHWSEII EMLRPKYPLY PFETKCSSEE GKDMPHSLDT TKIRELGLPP
301: FKSLAEMFDD CIKCFQDKGL L
Best Arabidopsis Sequence Match ( AT1G25460.1 )
(BLAST)
001: MAEYLVTGGT SFIASHVIKS LLEFGHYVRT TVRDSDEEKV GFLWDLKGAK ERLKIFEADL TIEGSFDEAV NGVDGVFHIA SRVSVRLDNN NLDKFDPNIS
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G25460]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.