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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:golgi
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008438.1-P Field mustard cytosol 100.0 100.0
CDY63972 Canola cytosol 98.49 98.49
AT1G80820.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 96.98 96.69
CDX87345 Canola cytosol 96.07 95.78
CDY39941 Canola cytosol 95.17 94.88
CDY35052 Canola cytosol 69.18 82.97
CDY33365 Canola cytosol 84.29 81.34
CDX81743 Canola cytosol 83.08 80.88
CDY52857 Canola cytosol 83.69 80.76
PGSC0003DMT400051049 Potato endoplasmic reticulum, peroxisome, plastid 75.83 75.6
Solyc03g116910.2.1 Tomato endoplasmic reticulum, peroxisome, plastid 74.02 73.8
VIT_09s0070g00240.t01 Wine grape cytosol 75.23 73.67
PGSC0003DMT400073398 Potato cytosol, endoplasmic reticulum, mitochondrion, plastid 73.41 73.19
Solyc06g068440.2.1 Tomato cytosol, endoplasmic reticulum, mitochondrion, plastid 73.41 73.19
KRH09656 Soybean cytosol 72.51 71.43
KRH47350 Soybean cytosol 71.0 70.78
KRH44552 Soybean cytosol 70.69 70.27
KRH23636 Soybean cytosol 71.6 70.12
GSMUA_Achr5P04460_001 Banana cytosol, peroxisome, plastid 66.77 65.77
TraesCS5A01G225100.3 Wheat cytosol, plastid 68.28 64.94
GSMUA_Achr11P... Banana plastid 65.26 64.86
TraesCS7D01G150500.1 Wheat cytosol 66.16 64.22
TraesCS5D01G232400.1 Wheat cytosol, peroxisome, plastid 67.98 64.1
HORVU7Hr1G030380.2 Barley cytosol 65.56 63.64
TraesCS5B01G223700.2 Wheat cytosol 68.58 63.59
GSMUA_Achr11P... Banana cytosol 64.35 63.58
TraesCS7A01G149000.1 Wheat cytosol 66.16 63.48
EER89338 Sorghum cytosol 65.86 63.01
TraesCS7D01G150600.1 Wheat cytosol 65.26 62.97
Zm00001d019669_P001 Maize cytosol 64.65 62.76
HORVU7Hr1G022220.4 Barley cytosol 64.05 62.35
OQU89100 Sorghum cytosol 64.95 62.14
Zm00001d045101_P001 Maize cytosol 63.75 62.06
Os08t0441500-01 Rice cytosol, peroxisome, plastid 67.37 61.77
Os09t0419200-01 Rice cytosol 66.47 61.62
Os09t0127300-01 Rice cytosol 63.14 60.23
HORVU0Hr1G013070.1 Barley cytosol 62.24 60.06
HORVU5Hr1G065330.5 Barley cytosol, peroxisome, plastid 68.28 59.79
EES15061 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 67.07 59.36
HORVU5Hr1G050940.1 Barley cytosol 64.05 59.22
TraesCS5A01G163400.1 Wheat cytosol 63.44 58.82
TraesCS5D01G168400.1 Wheat cytosol 63.14 58.54
TraesCS5D01G073300.1 Wheat cytosol 59.21 58.33
TraesCS7B01G052700.1 Wheat plastid 64.95 58.27
TraesCS5B01G069600.1 Wheat cytosol, mitochondrion, peroxisome 58.91 58.04
TraesCS5A01G061600.1 Wheat cytosol, mitochondrion, peroxisome 58.91 58.04
TraesCS5B01G160700.1 Wheat cytosol 63.75 57.81
Os08t0277200-01 Rice plastid 59.21 57.31
TraesCS5B01G069500.1 Wheat cytosol 58.61 57.23
TraesCS5D01G073400.1 Wheat cytosol 58.61 57.23
TraesCS5A01G061700.1 Wheat cytosol 57.4 56.05
TraesCS7B01G052600.1 Wheat cytosol 66.47 55.98
Zm00001d050417_P001 Maize cytosol 60.73 55.37
Zm00001d032152_P001 Maize cytosol 66.77 54.17
TraesCS6D01G136600.2 Wheat extracellular, vacuole 56.19 54.07
Os02t0180700-01 Rice extracellular 55.89 53.78
EES04640 Sorghum golgi, plastid 54.98 53.06
HORVU6Hr1G028980.18 Barley endoplasmic reticulum, extracellular 55.29 53.04
Zm00001d015513_P001 Maize golgi, peroxisome, plastid, vacuole 55.29 52.89
HORVU5Hr1G016690.3 Barley cytosol 55.59 50.97
HORVU5Hr1G016620.2 Barley cytosol 55.29 50.83
TraesCS6B01G175600.2 Wheat plastid 56.5 48.83
CDY14000 Canola cytosol 47.73 48.47
CDX92530 Canola cytosol 47.73 47.88
TraesCS5A01G061800.1 Wheat cytosol 40.18 47.67
CDY22576 Canola cytosol 46.53 47.38
CDY03618 Canola cytosol 46.53 47.38
CDY65726 Canola cytosol 46.53 47.38
CDY43911 Canola cytosol 46.22 47.08
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 42.9 44.1
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 43.2 44.0
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 42.9 43.83
CDX94968 Canola endoplasmic reticulum, golgi, plastid 42.9 43.56
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 42.3 43.48
CDX94967 Canola plasma membrane 42.3 43.48
TraesCS6A01G147300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 55.89 43.43
CDY45844 Canola cytosol, golgi, peroxisome 42.6 43.38
CDX94965 Canola golgi 41.99 42.77
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 41.69 42.72
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 41.69 42.72
CDY38590 Canola cytosol 39.27 40.5
CDX69634 Canola cytosol 38.97 40.19
CDX75502 Canola cytosol, extracellular, plastid 38.37 39.81
CDX69139 Canola cytosol, extracellular, plastid 38.37 39.81
CDY24810 Canola cytosol 38.07 39.75
CDY41656 Canola cytosol, plastid, vacuole 38.07 39.75
CDX96012 Canola cytosol, nucleus, peroxisome 38.07 39.25
CDY09372 Canola cytosol 37.16 38.32
CDY64748 Canola cytosol 42.9 37.97
CDY15830 Canola cytosol 36.25 37.38
CDY42105 Canola cytosol, plastid 35.35 36.45
CDX84989 Canola cytosol 35.05 36.14
CDX84988 Canola cytosol 30.51 33.11
CDY42108 Canola cytosol 20.24 28.51
HORVU5Hr1G016670.3 Barley plastid 1.21 9.52
Protein Annotations
EnsemblPlants:CDY64860EnsemblPlantsGene:GSBRNA2T00043752001Gene3D:3.40.50.720GO:G0WXK1GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF404
PFAM:PF01370ProteinID:AEK27160.1ProteinID:CDY64860ProteinID:CDY64860.1SEG:segSUPFAM:SSF51735
UniParc:UPI00021B093FUniProt:G0WXK1MapMan:21.6.1.5:::
Description
BnaA02g36250DBnaA02g36250D protein [Source:UniProtKB/TrEMBL;Acc:G0WXK1]
Coordinates
chrLK034579:-:24226..25955
Molecular Weight (calculated)
36516.9 Da
IEP (calculated)
7.188
GRAVY (calculated)
-0.193
Length
331 amino acids
Sequence
(BLAST)
001: MPADGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPA DPKNNHLREL QGAKERLTLH SADLLDYEAL CATIDGCDGV FHTASPMTDD PETMLEPAVN
101: GAKFVIDAAA KAKVKRVVFT SSIGAVYMNP NRDHQTIVDE NCWSDLDFCK NTKNWYCYGK MVAEQSAWET AKVKGVDLVV LNPVLVLGPP LQSAVNASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VMVYESPSAS GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI
301: KQSLYESVKS LQEKGHLPLP QDSNQNVIIE S
Best Arabidopsis Sequence Match ( AT1G80820.1 )
(BLAST)
001: MLVDGKLVCV TGAGGYIASW IVKLLLERGY TVRGTVRNPT DPKNNHLREL QGAKERLTLH SADLLDYEAL CATIDGCDGV FHTASPMTDD PETMLEPAVN
101: GAKFVIDAAA KAKVKRVVFT SSIGAVYMNP NRDTQAIVDE NCWSDLDFCK NTKNWYCYGK MLAEQSAWET AKAKGVDLVV LNPVLVLGPP LQSAINASLV
201: HILKYLTGSA KTYANLTQVY VDVRDVALGH VLVYEAPSAS GRYILAETAL HRGEVVEILA KFFPEYPLPT KCSDEKNPRA KPYKFTTQKI KDLGLEFKPI
301: KQSLYESVKS LQEKGHLPLP QDSNQNEVII ES
Arabidopsis Description
CCR2Cinnamoyl-CoA reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH9]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.