Factsheet for TraesCS5D01G073400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G069500.1	Wheat	cytosol	94.99	94.99
TraesCS5A01G061700.1	Wheat	cytosol	93.22	93.22
TraesCS5D01G073300.1	Wheat	cytosol	92.04	92.86
HORVU5Hr1G016620.2	Barley	cytosol	84.96	80.0
HORVU5Hr1G016690.3	Barley	cytosol	84.96	79.78
Os08t0277200-01	Rice	plastid	76.11	75.44
CDY35052	Canola	cytosol	53.39	65.58
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	61.95	63.25
GSMUA_Achr11P...	Banana	plastid	61.95	63.06
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	61.65	62.95
KRH47350	Soybean	cytosol	61.36	62.65
KRH44552	Soybean	cytosol	61.06	62.16
VIT_09s0070g00240.t01	Wine grape	cytosol	61.95	62.13
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	60.77	62.05
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	60.77	62.05
TraesCS7D01G150500.1	Wheat	cytosol	61.65	61.29
TraesCS7D01G150600.1	Wheat	cytosol	61.95	61.22
KRH09656	Soybean	cytosol	60.47	61.01
Bra026090.1-P	Field mustard	cytosol	59.88	59.53
CDX87345	Canola	cytosol	58.11	59.34
Bra035150.1-P	Field mustard	cytosol	58.11	59.34
CDY33365	Canola	cytosol	59.88	59.18
KRH23636	Soybean	cytosol	59.0	59.17
CDX81743	Canola	cytosol	59.29	59.12
CDY39941	Canola	cytosol	57.82	59.04
CDY52857	Canola	cytosol	59.59	58.89
Bra026737.1-P	Field mustard	cytosol	59.59	58.89
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	60.77	58.69
CDY64860	Canola	cytosol	57.23	58.61
Bra008438.1-P	Field mustard	cytosol	57.23	58.61
AT1G15950.1	Thale cress	cytosol	59.29	58.43
CDY63972	Canola	cytosol	56.93	58.31
TraesCS5D01G168400.1	Wheat	cytosol	61.36	58.26
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	56.64	57.83
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	53.69	52.91
TraesCS6D01G366200.1	Wheat	cytosol	51.62	50.72
TraesCS6D01G365700.1	Wheat	cytosol	51.03	50.14
TraesCS6D01G369500.1	Wheat	peroxisome	49.26	48.83
TraesCS6D01G366400.1	Wheat	cytosol	46.9	47.75
TraesCS6D01G365900.1	Wheat	cytosol	46.31	46.45
TraesCS6D01G366000.1	Wheat	cytosol	50.15	44.16
TraesCS5D01G541100.1	Wheat	golgi	40.71	41.82
TraesCS5D01G540800.1	Wheat	plastid	40.12	41.21
TraesCS4D01G343400.1	Wheat	cytosol	40.71	40.71
TraesCS5D01G486300.2	Wheat	cytosol	39.23	40.3
TraesCS3D01G033300.1	Wheat	cytosol	38.94	40.12
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	38.35	39.51
TraesCS3D01G342200.2	Wheat	cytosol	38.35	37.9
TraesCS5D01G278800.1	Wheat	mitochondrion	38.64	37.64
HORVU5Hr1G016670.3	Barley	plastid	2.65	21.43

Protein Annotations

EnsemblPlants:TraesCS5D01G073400.1	EnsemblPlantsGene:TraesCS5D01G073400	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF380	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:	:

Description

No Description!

Coordinates

chr5D:+:72613275..72614558

Molecular Weight (calculated)

37219.6 Da

IEP (calculated)

7.836

GRAVY (calculated)

-0.160

Length

339 amino acids

Sequence
(BLAST)

001: MGFDRANTAN CVATGRGRTV CVTGAGGFIA SWLVKLLLEK GYAVHGTVRN PDDVTRNAHL RALEGAAERL TLFRVDLLDK ESLVAAFQGC EGVFHTACPV
101: TDDPEKMIEP AVNGTRNVIN AVAEVGGIRR VVMTSSIGSV YMDPRRSLDG EANETCWSDL EFCKDTKNWY CYAKTVAEQA AWELAKERKL DLVVINPSLV
201: LGPLLQSAVN ASTWHIAKYL DGSVQTYTNA AQAYVHVRDV ADAHARAYEI PNAHGRYLCA GRTLHRAEVC RILAKFFPEY PVPTRCKEGA GEMKKGCRFS
301: SRRIMELGVG ITPASQCLYD TVTSLQDKGI LPRRDVDMS

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.