Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G149000.1 | Wheat | cytosol | 98.83 | 97.68 |
| TraesCS7D01G150600.1 | Wheat | cytosol | 97.07 | 96.5 |
| HORVU7Hr1G030380.2 | Barley | cytosol | 96.48 | 96.48 |
| TraesCS7B01G052600.1 | Wheat | cytosol | 97.95 | 84.99 |
| Zm00001d045101_P001 | Maize | cytosol | 83.58 | 83.82 |
| EER89338 | Sorghum | cytosol | 82.99 | 81.79 |
| TraesCS5D01G232400.1 | Wheat | cytosol, peroxisome, plastid | 75.95 | 73.79 |
| CDY35052 | Canola | cytosol | 58.65 | 72.46 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 71.26 | 71.89 |
| GSMUA_Achr5P04460_001 | Banana | cytosol, peroxisome, plastid | 70.67 | 71.73 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 68.62 | 70.48 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 68.62 | 70.48 |
| GSMUA_Achr11P... | Banana | cytosol | 69.21 | 70.45 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 68.04 | 69.88 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 68.04 | 69.88 |
| CDX81743 | Canola | cytosol | 69.21 | 69.41 |
| KRH47350 | Soybean | cytosol | 67.16 | 68.98 |
| KRH44552 | Soybean | cytosol | 66.86 | 68.47 |
| Bra026090.1-P | Field mustard | cytosol | 68.33 | 68.33 |
| CDY52857 | Canola | cytosol | 68.62 | 68.22 |
| Bra026737.1-P | Field mustard | cytosol | 68.62 | 68.22 |
| KRH09656 | Soybean | cytosol | 67.16 | 68.15 |
| CDY33365 | Canola | cytosol | 68.33 | 67.93 |
| AT1G15950.1 | Thale cress | cytosol | 67.74 | 67.15 |
| CDY63972 | Canola | cytosol | 65.1 | 67.07 |
| Bra035150.1-P | Field mustard | cytosol | 64.52 | 66.27 |
| CDX87345 | Canola | cytosol | 64.52 | 66.27 |
| Bra008438.1-P | Field mustard | cytosol | 64.22 | 66.16 |
| CDY64860 | Canola | cytosol | 64.22 | 66.16 |
| KRH23636 | Soybean | cytosol | 65.4 | 65.98 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 64.22 | 65.96 |
| CDY39941 | Canola | cytosol | 64.22 | 65.96 |
| TraesCS5D01G073300.1 | Wheat | cytosol | 61.29 | 62.2 |
| TraesCS5D01G073400.1 | Wheat | cytosol | 61.29 | 61.65 |
| TraesCS5D01G168400.1 | Wheat | cytosol | 61.58 | 58.82 |
| TraesCS6D01G136600.2 | Wheat | extracellular, vacuole | 57.18 | 56.69 |
| TraesCS6D01G369500.1 | Wheat | peroxisome | 56.01 | 55.85 |
| TraesCS6D01G365700.1 | Wheat | cytosol | 55.72 | 55.07 |
| TraesCS6D01G366200.1 | Wheat | cytosol | 55.13 | 54.49 |
| TraesCS6D01G365900.1 | Wheat | cytosol | 51.91 | 52.37 |
| TraesCS6D01G366400.1 | Wheat | cytosol | 51.03 | 52.25 |
| TraesCS6D01G366000.1 | Wheat | cytosol | 53.67 | 47.53 |
| TraesCS5D01G541100.1 | Wheat | golgi | 43.4 | 44.85 |
| TraesCS5D01G540800.1 | Wheat | plastid | 42.52 | 43.94 |
| TraesCS5D01G486300.2 | Wheat | cytosol | 41.35 | 42.73 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 41.94 | 42.18 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 39.88 | 41.34 |
| TraesCS7D01G248800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 39.59 | 41.03 |
| TraesCS5D01G278800.1 | Wheat | mitochondrion | 39.0 | 38.22 |
| TraesCS3D01G342200.2 | Wheat | cytosol | 38.42 | 38.19 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G150500.1 | EnsemblPlantsGene:TraesCS7D01G150500 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | ncoils:Coil | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF404 |
| PFAM:PF01370 | SEG:seg | SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:21.6.1.5 | : |
Description
No Description!
Coordinates
chr7D:-:99822598..99824247
Molecular Weight (calculated)
36515.6 Da
IEP (calculated)
6.505
GRAVY (calculated)
-0.046
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVGGEATGH GQTVCVTGAG GYIGSWIVKL LLEKGYAVRG TVRNPDDAKN AHLRGLAGAA ERLVLCKADL LDGDALRAAI AGCHGVFHTA SPVTDDPEEM
101: VEPAVRGTRY VIDAAAESST VRRVVLTSSI GAVAMDPSRA PDAVVDESCW SDLEFCKKTK NWYCYGKTVA EREAWEAAAA RGVDLVVVNP VLVQGPALQP
201: AVNASLTHVL KYLDGSAKTY ANAVQAYVHV RDTAAAHVLV FESPAAAGRY LCVADGAVLH REDVVTILRK FFPEYPIPSR CSDEVNPRKQ PYKMSNQRLR
301: ELGLEFTPVA QCLYDTVVSF QEKGVLPAPP APAQPATKEI N
101: VEPAVRGTRY VIDAAAESST VRRVVLTSSI GAVAMDPSRA PDAVVDESCW SDLEFCKKTK NWYCYGKTVA EREAWEAAAA RGVDLVVVNP VLVQGPALQP
201: AVNASLTHVL KYLDGSAKTY ANAVQAYVHV RDTAAAHVLV FESPAAAGRY LCVADGAVLH REDVVTILRK FFPEYPIPSR CSDEVNPRKQ PYKMSNQRLR
301: ELGLEFTPVA QCLYDTVVSF QEKGVLPAPP APAQPATKEI N
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.