Factsheet for TraesCS6D01G136600.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	peroxisome
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	91.86	91.59
TraesCS6B01G175600.2	Wheat	plastid	97.09	87.21
EES04640	Sorghum	golgi, plastid	86.34	86.59
Os02t0180700-01	Rice	extracellular	86.05	86.05
Zm00001d015513_P001	Maize	golgi, peroxisome, plastid, vacuole	84.01	83.53
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	95.64	77.23
GSMUA_Achr11P...	Banana	plastid	63.08	65.17
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	58.14	60.24
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	58.14	60.24
KRH47350	Soybean	cytosol	57.85	59.94
TraesCS5D01G168400.1	Wheat	cytosol	61.05	58.82
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	56.69	58.73
KRH44552	Soybean	cytosol	56.69	58.56
KRH09656	Soybean	cytosol	56.98	58.33
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	56.1	58.13
CDY35052	Canola	cytosol	46.51	57.97
VIT_09s0070g00240.t01	Wine grape	cytosol	56.4	57.4
TraesCS7D01G150500.1	Wheat	cytosol	56.69	57.18
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	54.94	56.93
KRH23636	Soybean	cytosol	55.81	56.8
CDY63972	Canola	cytosol	54.65	56.8
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	57.85	56.7
TraesCS7D01G150600.1	Wheat	cytosol	56.4	56.56
CDX87345	Canola	cytosol	54.36	56.33
Bra035150.1-P	Field mustard	cytosol	54.36	56.33
CDY64860	Canola	cytosol	54.07	56.19
Bra008438.1-P	Field mustard	cytosol	54.07	56.19
CDX81743	Canola	cytosol	55.52	56.18
CDY39941	Canola	cytosol	53.78	55.72
Bra026090.1-P	Field mustard	cytosol	55.23	55.72
CDY52857	Canola	cytosol	55.52	55.69
Bra026737.1-P	Field mustard	cytosol	55.52	55.69
CDY33365	Canola	cytosol	55.23	55.39
AT1G15950.1	Thale cress	cytosol	54.94	54.94
TraesCS5D01G073300.1	Wheat	cytosol	52.62	53.87
TraesCS5D01G073400.1	Wheat	cytosol	52.91	53.69
TraesCS6D01G365700.1	Wheat	cytosol	49.42	49.28
TraesCS6D01G366200.1	Wheat	cytosol	48.84	48.7
TraesCS6D01G369500.1	Wheat	peroxisome	47.67	47.95
TraesCS6D01G365900.1	Wheat	cytosol	46.51	47.34
TraesCS6D01G366400.1	Wheat	cytosol	44.77	46.25
TraesCS6D01G366000.1	Wheat	cytosol	47.67	42.6
TraesCS5D01G541100.1	Wheat	golgi	39.24	40.91
TraesCS5D01G540800.1	Wheat	plastid	38.66	40.3
TraesCS5D01G486300.2	Wheat	cytosol	38.08	39.7
TraesCS4D01G343400.1	Wheat	cytosol	37.79	38.35
TraesCS3D01G033300.1	Wheat	cytosol	35.76	37.39
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.76	37.39
TraesCS3D01G342200.2	Wheat	cytosol	36.34	36.44
TraesCS5D01G278800.1	Wheat	mitochondrion	34.88	34.48

Protein Annotations

EnsemblPlants:TraesCS6D01G136600.2	EnsemblPlantsGene:TraesCS6D01G136600	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF432	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	TMHMM:TMhelix	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr6D:-:104986116..104988299

Molecular Weight (calculated)

37713.4 Da

IEP (calculated)

8.204

GRAVY (calculated)

-0.192

Length

344 amino acids

Sequence
(BLAST)

001: MAVVVCVTGA GGFIGSWIVK LLLARGYAVR GTSRRADDPK NAHLWALDGA AERLTMVQVD LLDRASLRAA FHGCDGVIHT ASPMHDTPEE IIEPVITGTL
101: NVVEMAADAG VRRVVLSSTI GTMYMNPHRD PDAPLDESCW SDLDYCKQTK NWYCYAKTIA ERGAWEAARA LGLDLAVVIP VVTLGELLQP SMNTSTRHIL
201: KYLTGEAKAY VNESHAYVHV KDAAEAHVRV LEAPNAGGRR YVCAERTLHR GELCRILAGL FPEYPIPTRC KDEVNPPKKG YKYTNQPLKD LGMKFTPVQE
301: YLYEAVKSLQ EKGFIQKASG NKGLASRGSS PPQNSTAPVF MSKL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.