Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 2
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G225100.3 | Wheat | cytosol, plastid | 98.29 | 99.14 |
| TraesCS5B01G223700.2 | Wheat | cytosol | 97.15 | 95.52 |
| Os09t0419200-01 | Rice | cytosol | 90.31 | 88.8 |
| HORVU5Hr1G065330.5 | Barley | cytosol, peroxisome, plastid | 94.87 | 88.1 |
| HORVU0Hr1G013070.1 | Barley | cytosol | 84.05 | 86.01 |
| GSMUA_Achr5P04460_001 | Banana | cytosol, peroxisome, plastid | 74.64 | 77.98 |
| GSMUA_Achr11P... | Banana | cytosol | 74.07 | 77.61 |
| TraesCS7D01G150500.1 | Wheat | cytosol | 73.79 | 75.95 |
| TraesCS7D01G150600.1 | Wheat | cytosol | 73.5 | 75.22 |
| CDY35052 | Canola | cytosol | 58.97 | 75.0 |
| VIT_09s0070g00240.t01 | Wine grape | cytosol | 70.66 | 73.37 |
| CDX81743 | Canola | cytosol | 68.95 | 71.18 |
| Bra026737.1-P | Field mustard | cytosol | 69.52 | 71.14 |
| CDY52857 | Canola | cytosol | 69.52 | 71.14 |
| PGSC0003DMT400051049 | Potato | endoplasmic reticulum, peroxisome, plastid | 67.24 | 71.08 |
| PGSC0003DMT400073398 | Potato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 66.95 | 70.78 |
| Bra026090.1-P | Field mustard | cytosol | 68.66 | 70.67 |
| CDY33365 | Canola | cytosol | 68.95 | 70.55 |
| KRH09656 | Soybean | cytosol | 67.52 | 70.54 |
| Solyc03g116910.2.1 | Tomato | endoplasmic reticulum, peroxisome, plastid | 66.38 | 70.18 |
| Solyc06g068440.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, plastid | 66.38 | 70.18 |
| KRH47350 | Soybean | cytosol | 66.1 | 69.88 |
| AT1G15950.1 | Thale cress | cytosol | 68.38 | 69.77 |
| KRH44552 | Soybean | cytosol | 65.53 | 69.07 |
| CDY63972 | Canola | cytosol | 64.39 | 68.28 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 64.39 | 68.07 |
| Bra035150.1-P | Field mustard | cytosol | 64.39 | 68.07 |
| CDX87345 | Canola | cytosol | 64.39 | 68.07 |
| Bra008438.1-P | Field mustard | cytosol | 64.1 | 67.98 |
| CDY64860 | Canola | cytosol | 64.1 | 67.98 |
| CDY39941 | Canola | cytosol | 64.1 | 67.77 |
| KRH23636 | Soybean | cytosol | 64.96 | 67.46 |
| TraesCS5D01G168400.1 | Wheat | cytosol | 63.82 | 62.75 |
| TraesCS5D01G073400.1 | Wheat | cytosol | 58.69 | 60.77 |
| TraesCS5D01G073300.1 | Wheat | cytosol | 58.12 | 60.71 |
| TraesCS6D01G136600.2 | Wheat | extracellular, vacuole | 56.7 | 57.85 |
| TraesCS6D01G365700.1 | Wheat | cytosol | 54.99 | 55.94 |
| TraesCS6D01G369500.1 | Wheat | peroxisome | 54.42 | 55.85 |
| TraesCS6D01G366200.1 | Wheat | cytosol | 54.42 | 55.36 |
| TraesCS6D01G366400.1 | Wheat | cytosol | 52.14 | 54.95 |
| TraesCS6D01G365900.1 | Wheat | cytosol | 52.71 | 54.73 |
| TraesCS6D01G366000.1 | Wheat | cytosol | 53.28 | 48.57 |
| TraesCS5D01G541100.1 | Wheat | golgi | 44.73 | 47.58 |
| TraesCS5D01G540800.1 | Wheat | plastid | 44.16 | 46.97 |
| TraesCS5D01G486300.2 | Wheat | cytosol | 41.88 | 44.55 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 43.02 | 44.54 |
| TraesCS3D01G342200.2 | Wheat | cytosol | 40.74 | 41.69 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 39.03 | 41.64 |
| TraesCS7D01G248800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 37.32 | 39.82 |
| TraesCS5D01G278800.1 | Wheat | mitochondrion | 38.75 | 39.08 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G232400.1 | EnsemblPlantsGene:TraesCS5D01G232400 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF404 | PFAM:PF01370 |
| SEG:seg | SUPFAM:SSF51735 | TIGR:cd08958 | MapMan:21.6.1.5 | : | : |
Description
No Description!
Coordinates
chr5D:+:339352408..339356153
Molecular Weight (calculated)
37643.9 Da
IEP (calculated)
6.578
GRAVY (calculated)
-0.080
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVVAAAAAA AAQELPGHGQ TVCVTGAAGY IASWLVKLLL ERGYTVKGTV RNPGTHDPKN AHLKALDGAA ERLVLCKADL LDYDAICAAV EGCHGVFHTA
101: SPVTDDPEQM VEPAVRGTEY VINAAADAGT VRRVVFTSSI GAVTMDPNRG PDVVVDESCW SDLEFCKKTK NWYCYGKAVA EQAAWEKAAA RGVDLVVVNP
201: VLVVGPLLQP TVNASAAHIL KYLDGSAKKY ANAVQAYVDV RDVAAAHVRV FEAPGASGRH LCAERVLHRE DVVHILGKLF PEYPVPTRCS DEVNPRKQPY
301: KMSNQKLQDL GLQFTPVNDS LYETVKSLQE KGHLPAPRKD ILPAELDGAT A
101: SPVTDDPEQM VEPAVRGTEY VINAAADAGT VRRVVFTSSI GAVTMDPNRG PDVVVDESCW SDLEFCKKTK NWYCYGKAVA EQAAWEKAAA RGVDLVVVNP
201: VLVVGPLLQP TVNASAAHIL KYLDGSAKKY ANAVQAYVDV RDVAAAHVRV FEAPGASGRH LCAERVLHRE DVVHILGKLF PEYPVPTRCS DEVNPRKQPY
301: KMSNQKLQDL GLQFTPVNDS LYETVKSLQE KGHLPAPRKD ILPAELDGAT A
001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS
Arabidopsis Description
CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.