Factsheet for VIT_09s0070g00240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35052	Canola	cytosol	68.64	84.06
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	81.95	83.43
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	81.36	82.83
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	81.36	82.83
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	80.18	81.63
KRH47350	Soybean	cytosol	79.88	81.33
KRH44552	Soybean	cytosol	79.88	81.08
KRH09656	Soybean	cytosol	79.29	79.76
Bra026090.1-P	Field mustard	cytosol	79.88	79.18
CDY33365	Canola	cytosol	79.88	78.72
CDX81743	Canola	cytosol	78.99	78.53
CDY52857	Canola	cytosol	79.29	78.13
Bra026737.1-P	Field mustard	cytosol	78.99	77.84
KRH23636	Soybean	cytosol	77.51	77.51
AT1G15950.1	Thale cress	cytosol	78.7	77.33
CDY63972	Canola	cytosol	73.96	75.53
CDY64860	Canola	cytosol	73.67	75.23
Bra008438.1-P	Field mustard	cytosol	73.67	75.23
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	73.37	74.7
CDX87345	Canola	cytosol	73.08	74.4
Bra035150.1-P	Field mustard	cytosol	73.08	74.4
GSMUA_Achr5P04460_001	Banana	cytosol, peroxisome, plastid	73.67	74.11
CDY39941	Canola	cytosol	72.49	73.8
GSMUA_Achr11P...	Banana	cytosol	71.6	72.24
TraesCS5A01G225100.3	Wheat	cytosol, plastid	73.67	71.55
TraesCS7D01G150500.1	Wheat	cytosol	71.89	71.26
HORVU7Hr1G030380.2	Barley	cytosol	71.6	70.97
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	73.37	70.66
TraesCS7A01G149000.1	Wheat	cytosol	71.6	70.14
TraesCS5B01G223700.2	Wheat	cytosol	73.96	70.03
TraesCS7D01G150600.1	Wheat	cytosol	71.01	69.97
GSMUA_Achr11P...	Banana	plastid	68.93	69.97
EER89338	Sorghum	cytosol	71.6	69.94
Os09t0419200-01	Rice	cytosol	73.67	69.75
HORVU7Hr1G022220.4	Barley	cytosol	69.53	69.12
Zm00001d045101_P001	Maize	cytosol	68.93	68.53
Os08t0441500-01	Rice	cytosol, peroxisome, plastid	73.08	68.42
HORVU0Hr1G013070.1	Barley	cytosol	68.05	67.06
EES15061	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.96	66.84
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	73.96	66.14
Zm00001d019669_P001	Maize	cytosol	66.27	65.69
OQU89100	Sorghum	cytosol	67.16	65.61
TraesCS7B01G052700.1	Wheat	plastid	71.3	65.31
TraesCS5D01G073300.1	Wheat	cytosol	63.31	63.69
Os09t0127300-01	Rice	cytosol	65.09	63.4
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	62.43	62.8
Zm00001d050417_P001	Maize	cytosol	67.16	62.53
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	62.13	62.5
TraesCS7B01G052600.1	Wheat	cytosol	72.19	62.09
TraesCS5B01G069500.1	Wheat	cytosol	62.13	61.95
TraesCS5D01G073400.1	Wheat	cytosol	62.13	61.95
Zm00001d032152_P001	Maize	cytosol	73.96	61.27
TraesCS5A01G061700.1	Wheat	cytosol	60.95	60.77
TraesCS5A01G163400.1	Wheat	cytosol	63.91	60.5
HORVU5Hr1G050940.1	Barley	cytosol	63.61	60.06
TraesCS5D01G168400.1	Wheat	cytosol	63.31	59.94
Os08t0277200-01	Rice	plastid	60.65	59.94
TraesCS5B01G160700.1	Wheat	cytosol	64.5	59.73
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	57.4	56.4
EES04640	Sorghum	golgi, plastid	57.1	56.27
Os02t0180700-01	Rice	extracellular	57.1	56.1
HORVU5Hr1G016690.3	Barley	cytosol	59.17	55.4
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	56.51	55.36
HORVU5Hr1G016620.2	Barley	cytosol	58.88	55.28
Zm00001d015513_P001	Maize	golgi, peroxisome, plastid, vacuole	55.92	54.62
TraesCS5A01G061800.1	Wheat	cytosol	42.31	51.25
VIT_06s0004g02380.t01	Wine grape	endoplasmic reticulum, golgi, plastid	48.52	50.93
TraesCS6B01G175600.2	Wheat	plastid	57.1	50.39
VIT_06s0004g02370.t01	Wine grape	endoplasmic reticulum, golgi	47.34	49.69
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	31.07	48.61
VIT_13s0047g00940.t01	Wine grape	cytosol	46.15	48.3
VIT_03s0110g00350.t01	Wine grape	cytosol	45.86	47.84
VIT_06s0004g07130.t01	Wine grape	cytosol	46.45	47.72
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	44.97	47.06
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	44.97	46.48
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	44.67	46.32
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	44.67	46.32
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	44.67	46.32
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	44.08	45.57
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	57.1	45.31
VIT_13s0101g00240.t01	Wine grape	cytosol	34.02	44.57
VIT_03s0038g04220.t01	Wine grape	endoplasmic reticulum	42.31	44.27
VIT_13s0101g00250.t01	Wine grape	cytosol	36.39	43.77
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	40.53	42.81
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	42.6	41.74
VIT_13s0067g00680.t01	Wine grape	cytosol	33.43	40.79
VIT_12s0035g02070.t01	Wine grape	cytosol	39.05	39.64
VIT_03s0038g04230.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	29.29	39.44
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	39.35	38.55
VIT_13s0067g00690.t01	Wine grape	cytosol	34.02	37.22
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	45.56	25.25
HORVU5Hr1G016670.3	Barley	plastid	0.89	7.14

Protein Annotations

EntrezGene:100251623	wikigene:100251623	MapMan:21.6.1.5	Gene3D:3.40.50.720	ProteinID:CBI38941	ProteinID:CBI38941.3
UniProt:D7U877	InterPro:Epimerase_deHydtase	EMBL:FN596740	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	EntrezGene:LOC100251623	wikigene:LOC100251623	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366
PANTHER:PTHR10366:SF404	SUPFAM:SSF51735	TIGR:TC63164	TIGR:TC66815	UniParc:UPI00015CBA71	ArrayExpress:VIT_09s0070g00240
EnsemblPlantsGene:VIT_09s0070g00240	EnsemblPlants:VIT_09s0070g00240.t01	unigene:Vvi.15864	RefSeq:XP_002273454	RefSeq:XP_002273454.1	SEG:seg

Description

No Description!

Coordinates

chr9:-:13365545..13368514

Molecular Weight (calculated)

37227.7 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.130

Length

338 amino acids

Sequence
(BLAST)

001: MPIDASSPSS SGQIVCVTGA GGFIASWIVK LLLERGYTVK GTVRNPDDPK NSHLRELEGA KERLILCKAD LMDYESLKEA INGCHGVFHT ASPVTDDPEE
101: MVEPAVNGTK NVIIAAAEAK VRRVVFTSSI GAVYMDPNRS PDQVVDESCW SDLEFCKNTK NWYCYGKAVA EQAAWEVAKE KEVDLVVVNP VLVLGPLLQS
201: TVNASIIHIL KYLTGSAKTY ANSVQAYVHV KDVALAHILV FEAPSASGRY LCAESVLHRG DVVEILAKFF PEYPIPTKCS DEVKPRAKPY KFSNQKLREL
301: GLEFIPVKQC LYETVKTLQE KGHVPVPPQH DDSLRIQS

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.