Factsheet for TraesCS5B01G160700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G163400.1	Wheat	cytosol	95.34	97.48
TraesCS5D01G168400.1	Wheat	cytosol	95.07	97.2
HORVU5Hr1G050940.1	Barley	cytosol	93.7	95.53
OQU89100	Sorghum	cytosol	78.63	82.95
Zm00001d019669_P001	Maize	cytosol	77.26	82.7
Os09t0127300-01	Rice	cytosol	75.34	79.25
Solyc03g116910.2.1	Tomato	endoplasmic reticulum, peroxisome, plastid	62.47	68.67
PGSC0003DMT400051049	Potato	endoplasmic reticulum, peroxisome, plastid	62.47	68.67
GSMUA_Achr11P...	Banana	plastid	61.92	67.87
Solyc06g068440.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plastid	60.55	66.57
PGSC0003DMT400073398	Potato	cytosol, endoplasmic reticulum, mitochondrion, plastid	60.55	66.57
CDY35052	Canola	cytosol	49.59	65.58
KRH44552	Soybean	cytosol	59.18	64.86
VIT_09s0070g00240.t01	Wine grape	cytosol	59.73	64.5
KRH47350	Soybean	cytosol	58.36	64.16
KRH09656	Soybean	cytosol	58.9	63.99
CDY64860	Canola	cytosol	57.81	63.75
Bra008438.1-P	Field mustard	cytosol	57.81	63.75
Bra026090.1-P	Field mustard	cytosol	59.45	63.64
Bra026737.1-P	Field mustard	cytosol	59.73	63.56
CDX81743	Canola	cytosol	59.18	63.53
CDY63972	Canola	cytosol	57.53	63.44
CDY52857	Canola	cytosol	59.18	62.97
CDY33365	Canola	cytosol	59.18	62.97
AT1G80820.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	57.26	62.95
Bra035150.1-P	Field mustard	cytosol	57.26	62.95
CDX87345	Canola	cytosol	57.26	62.95
AT1G15950.1	Thale cress	cytosol	58.9	62.5
CDY39941	Canola	cytosol	56.71	62.35
TraesCS5B01G223700.2	Wheat	cytosol	60.82	62.18
KRH23636	Soybean	cytosol	56.99	61.54
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	56.44	61.31
TraesCS5B01G069500.1	Wheat	cytosol	56.44	60.77
TraesCS7B01G052700.1	Wheat	plastid	56.99	56.37
TraesCS7B01G052600.1	Wheat	cytosol	57.81	53.69
TraesCS6B01G175600.2	Wheat	plastid	56.16	53.52
TraesCS6B01G420200.1	Wheat	cytosol	48.77	51.59
TraesCS6B01G420000.1	Wheat	cytosol	48.22	51.01
TraesCS6B01G420900.1	Wheat	peroxisome	46.58	49.56
TraesCS6B01G420500.1	Wheat	cytosol	45.75	49.41
TraesCS5B01G414300.1	Wheat	cytosol	44.38	48.36
TraesCS5B01G547200.1	Wheat	unclear	40.55	44.85
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	44.38	44.51
TraesCS5B01G547000.1	Wheat	golgi	38.36	42.42
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.62	39.51
TraesCS3B01G380500.1	Wheat	cytosol	35.34	39.45
TraesCS3B01G380600.1	Wheat	cytosol	35.07	38.79
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	23.84	38.5
TraesCS3B01G036600.1	Wheat	cytosol	34.52	38.3
TraesCS5B01G486500.1	Wheat	cytosol	34.25	37.88
TraesCS5B01G271500.1	Wheat	mitochondrion	35.34	37.07

Protein Annotations

EnsemblPlants:TraesCS5B01G160700.1	EnsemblPlantsGene:TraesCS5B01G160700	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF552	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr5B:-:296376166..296378964

Molecular Weight (calculated)

40174.7 Da

IEP (calculated)

7.078

GRAVY (calculated)

-0.151

Length

365 amino acids

Sequence
(BLAST)

001: MPIEAADNVP AELPGHGRTV CVTGAGGFIA SWLVKRLLQK GYTVRGTVRN PVDPKNDHLR AFDGAADRLI LLRADLMEPE TLVEAFTGCE GIFHAASPVT
101: DDPEKMIEPA IRGTKYVITA AADMGIKRVV FTSTIGTVYM NPHRDASKPV DDTCWSDLEY CKKTANWYCY AKTVAEQDAL ETARQRGIEL IVVNPVLVLG
201: PLLQPTVNAS TEHVMKYLTG SAKTYVNAAQ AYVHVKDVAE AHVRVYEAPG AHGRYICAEG TTLHRGDLCR VLGKLFPEYP VPTKCKDEVN PPVKGYKFTN
301: QRLKDLGMEF VPVLQSIYET VKSLQEKGML PVLPPGDDIP DNLHEQLMMK PAQLLRKHVL IGLGV

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.