Factsheet for TraesCS5B01G547000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G540800.1	Wheat	plastid	98.48	98.48
TraesCS4A01G331900.2	Wheat	golgi, unclear	97.58	97.58
TraesCS5B01G547200.1	Wheat	unclear	91.52	91.52
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	60.91	88.94
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	84.85	83.33
KXG30065	Sorghum	plastid	82.42	81.44
GSMUA_Achr8P24070_001	Banana	golgi, plastid	71.21	72.76
GSMUA_Achr8P24060_001	Banana	plastid	68.79	70.28
Zm00001d015956_P002	Maize	plastid	80.91	69.71
GSMUA_Achr8P24040_001	Banana	plastid	68.18	69.66
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	69.09	69.51
VIT_03s0110g00350.t01	Wine grape	cytosol	65.76	66.98
VIT_13s0064g00290.t01	Wine grape	cytosol, extracellular, plastid	42.73	65.28
VIT_13s0047g00940.t01	Wine grape	cytosol	62.73	64.09
VIT_13s0047g00540.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	61.82	63.16
VIT_13s0064g00270.t01	Wine grape	cytosol, endoplasmic reticulum	61.21	61.96
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	61.21	61.77
VIT_13s0101g00240.t01	Wine grape	cytosol	47.58	60.85
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	59.7	60.24
VIT_13s0067g00530.t01	Wine grape	endoplasmic reticulum	59.09	59.82
VIT_13s0067g00460.t01	Wine grape	endoplasmic reticulum	59.09	59.82
VIT_15s0107g00210.t01	Wine grape	extracellular, plastid	60.0	57.39
VIT_13s0101g00250.t01	Wine grape	cytosol	48.79	57.3
Solyc01g087640.2.1	Tomato	cytosol	55.45	55.79
Bra031666.1-P	Field mustard	golgi	52.73	55.06
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	53.64	54.97
AT1G66800.1	Thale cress	peroxisome, plasma membrane, plastid	52.42	54.23
VIT_13s0067g00680.t01	Wine grape	cytosol	45.45	54.15
VIT_13s0067g00690.t01	Wine grape	cytosol	50.61	54.05
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	52.73	54.04
CDX94965	Canola	golgi	52.42	53.23
Bra020021.1-P	Field mustard	golgi	51.82	53.11
AT1G09510.1	Thale cress	cytosol, plastid, vacuole	51.52	52.8
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	51.82	52.78
CDY45844	Canola	cytosol, golgi, peroxisome	51.82	52.62
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	51.82	52.62
AT1G09490.1	Thale cress	golgi	51.21	52.48
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	51.52	52.31
Bra020019.1-P	Field mustard	extracellular, golgi	51.52	52.15
CDX94967	Canola	plasma membrane	50.61	51.86
AT1G09500.1	Thale cress	endoplasmic reticulum	50.91	51.69
Bra020020.1-P	Field mustard	extracellular, golgi	50.3	51.55
VIT_13s0047g00550.t01	Wine grape	mitochondrion, vacuole	53.03	50.72
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	49.7	50.31
AT1G09480.1	Thale cress	cytosol	51.52	46.07
CDY64748	Canola	cytosol	52.12	45.99
TraesCS5B01G223700.2	Wheat	cytosol	46.97	43.42
TraesCS5B01G486500.1	Wheat	cytosol	42.73	42.73
TraesCS7B01G141100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	42.42	42.55
TraesCS3B01G380600.1	Wheat	cytosol	42.12	42.12
TraesCS3B01G380500.1	Wheat	cytosol	41.21	41.59
TraesCS5B01G069600.1	Wheat	cytosol, mitochondrion, peroxisome	40.91	40.18
TraesCS6B01G420500.1	Wheat	cytosol	40.91	39.94
TraesCS5B01G069500.1	Wheat	cytosol	40.91	39.82
TraesCS5B01G271500.1	Wheat	mitochondrion	41.82	39.66
TraesCS6B01G420200.1	Wheat	cytosol	40.3	38.55
TraesCS6B01G420900.1	Wheat	peroxisome	40.0	38.48
TraesCS5B01G160700.1	Wheat	cytosol	42.42	38.36
TraesCS3B01G036600.1	Wheat	cytosol	38.18	38.3
TraesCS7B01G052700.1	Wheat	plastid	42.73	38.21
TraesCS6B01G420000.1	Wheat	cytosol	38.79	37.1
TraesCS5B01G414300.1	Wheat	cytosol	37.27	36.72
TraesCS7B01G052600.1	Wheat	cytosol	42.73	35.88
TraesCS5B01G414500.1	Wheat	mitochondrion, plastid	37.27	33.79
VIT_13s0047g00990.t01	Wine grape	endoplasmic reticulum	62.42	33.77
TraesCS6B01G175600.2	Wheat	plastid	39.09	33.68

Protein Annotations

EnsemblPlants:TraesCS5B01G547000.1	EnsemblPlantsGene:TraesCS5B01G547000	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0003854
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016616
GO:GO:0055114	InterPro:3Beta_OHSteriod_DH/Estase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407	PFAM:PF01073
SUPFAM:SSF51735	TIGR:cd08958	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5B:+:700216666..700224998

Molecular Weight (calculated)

36253.6 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.005

Length

330 amino acids

Sequence
(BLAST)

001: MSSGMGKVVC VTGGLGYIAS WLVKLLLHRG YTVCATVRDT ADPKKTLHLQ ALDGAKDRLH LFKASLLEEG SFDAAIAGSD CVFHTASPFY HNVKDPKAEL
101: LDPAVNGTLN VLRSCKKASI KRVIITSSMA AVAYNGKPRT PDVVVDETWF SSAEVCEKNE QWYVLSKTLA EEAAWKFAND NGFEIVTINP AMVIGPLLQP
201: TLNTSAEAIL KFINGSSSTY PNFSFGWINV KDVALAHILA YEVPSANGRY CMVERVAHHS EIVKIIHEMY PNFPVPEKCA DDAPFVPIYQ VSKDKIRSLG
301: MELIPLETSL KETIESLREK GFVTSESSHL

Best Arabidopsis Sequence Match ( AT5G19440.1 )
(BLAST)

001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLEGAKERL HLFKADLLEQ GSFDSAIDGC HGVFHTASPF FNDAKDPQAE
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF

Arabidopsis Description

At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.