CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64747	Canola	extracellular, golgi, mitochondrion, plastid	92.31	92.59
CDX94967	Canola	plasma membrane	84.0	84.78
CDX94966	Canola	golgi, mitochondrion, peroxisome, plastid	83.08	83.85
CDX94968	Canola	endoplasmic reticulum, golgi, plastid	81.23	80.98
AT1G09490.1	Thale cress	golgi	77.54	78.26
CDY64748	Canola	cytosol	84.0	72.99
CDY68009	Canola	cytosol, endoplasmic reticulum, golgi	69.23	69.88
AT1G09480.1	Thale cress	cytosol	78.46	69.11
CDY72415	Canola	cytosol, endoplasmic reticulum, peroxisome	67.38	67.38
CDY45844	Canola	cytosol, golgi, peroxisome	66.15	66.15
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	41.54	61.93
GSMUA_Achr8P24060_001	Banana	plastid	56.31	56.66
CDY14000	Canola	cytosol	56.62	56.44
GSMUA_Achr8P24070_001	Banana	golgi, plastid	55.69	56.04
VIT_13s0067g00590.t01	Wine grape	endoplasmic reticulum, golgi	56.31	55.96
VIT_13s0067g00620.t01	Wine grape	endoplasmic reticulum, golgi	56.31	55.96
Solyc01g087640.2.1	Tomato	cytosol	56.31	55.79
GSMUA_Achr8P24040_001	Banana	plastid	55.38	55.73
CDX92530	Canola	cytosol	56.0	55.15
CDY65726	Canola	cytosol	55.08	55.08
CDY03618	Canola	cytosol	55.08	55.08
CDY22576	Canola	cytosol	54.77	54.77
CDY43911	Canola	cytosol	54.77	54.77
TraesCS4A01G331900.2	Wheat	golgi, unclear	54.46	53.64
TraesCS5D01G540800.1	Wheat	plastid	54.46	53.64
GSMUA_Achr4P10200_001	Banana	cytosol, golgi, plastid	53.23	52.74
TraesCS5B01G547200.1	Wheat	unclear	53.54	52.73
TraesCS5B01G547000.1	Wheat	golgi	53.23	52.42
TraesCS5D01G541100.1	Wheat	golgi	52.92	52.12
KXG30065	Sorghum	plastid	52.92	51.5
Os01t0528800-01	Rice	cytosol, endoplasmic reticulum, plastid	52.92	51.19
HORVU5Hr1G122150.1	Barley	plastid	55.69	50.28
TraesCS4D01G343400.1	Wheat	cytosol	51.08	48.97
CDY35052	Canola	cytosol	40.31	47.46
TraesCS5A01G517000.1	Wheat	mitochondrion	51.69	46.54
Zm00001d015956_P002	Maize	plastid	53.54	45.43
TraesCS5B01G546700.1	Wheat	peroxisome, plastid	31.38	45.13
HORVU4Hr1G085100.1	Barley	cytosol	51.38	44.89
CDX81743	Canola	cytosol	46.15	44.12
CDY33365	Canola	cytosol	46.15	43.73
CDY52857	Canola	cytosol	45.85	43.44
CDY24810	Canola	cytosol	41.85	42.9
CDX87345	Canola	cytosol	43.69	42.77
CDY39941	Canola	cytosol	43.69	42.77
CDX75502	Canola	cytosol, extracellular, plastid	41.54	42.32
CDY63972	Canola	cytosol	43.08	42.3
CDY64860	Canola	cytosol	42.77	41.99
CDX69139	Canola	cytosol, extracellular, plastid	40.92	41.69
CDY41656	Canola	cytosol, plastid, vacuole	40.31	41.32
CDY57397	Canola	cytosol, endoplasmic reticulum, peroxisome	40.92	41.18
CDY32979	Canola	cytosol, endoplasmic reticulum, peroxisome	40.62	40.87
CDY38590	Canola	cytosol	38.77	39.25
CDX96012	Canola	cytosol, nucleus, peroxisome	38.46	38.94
CDX69634	Canola	cytosol	38.46	38.94
CDY09372	Canola	cytosol	35.38	35.83
CDY15830	Canola	cytosol	34.15	34.58
CDY42105	Canola	cytosol, plastid	34.15	34.58
CDX84989	Canola	cytosol	34.15	34.58
CDX84988	Canola	cytosol	31.08	33.11
CDY42108	Canola	cytosol	19.38	26.81

Protein Annotations

EnsemblPlants:CDX94965	EnsemblPlantsGene:GSBRNA2T00100453001	Gene3D:3.40.50.720	GO:A0A078E039	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF492
PFAM:PF01370	ProteinID:CDX94965	ProteinID:CDX94965.1	SUPFAM:SSF51735	UniParc:UPI0004EEF10D	MapMan:35.1

Description

BnaC05g07060D

Coordinates

chrLK031886:-:452330..454000

Molecular Weight (calculated)

36007.0 Da

IEP (calculated)

5.004

GRAVY (calculated)

0.126

Length

325 amino acids

Sequence
(BLAST)

001: MNGGGKVVCV TGASGYIASW IVKLLLLRGY TVRATVRNPT DTAKTEHLLA LEGAKERLKL FKADLLEECS FEQAIEGCDA VFHTASPVKY IVTDPQTELI
101: DPAVKGTLNV LNTCKKTSSV KRVILTSSTA AVLVRPLEPK DVVDETFFSD PSVCTELKLW YPLCKTLAEN AAWQFTKDNG MDMVVINPGF IIGPLLQPTL
201: NFSVEIIVDM VKGKNPFNFI NYRFVDVRDV ALAHVKALEI LSANGRYLID GPSMTINEIR DTIHELIPDL CIADMNGESE MKEIMTKEII YEVCVEKVKT
301: LGVEFTPLES SLRDTIISLK EKCLL

Best Arabidopsis Sequence Match ( AT1G09480.1 )
(BLAST)

001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.