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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020021.1-P Field mustard golgi 85.03 98.76
CDX94966 Canola golgi, mitochondrion, peroxisome, plastid 82.35 95.65
CDY64747 Canola extracellular, golgi, mitochondrion, plastid 74.06 85.49
CDX94965 Canola golgi 72.99 84.0
CDX94967 Canola plasma membrane 71.66 83.23
CDX94968 Canola endoplasmic reticulum, golgi, plastid 69.52 79.75
AT1G09490.1 Thale cress golgi 67.65 78.57
AT1G09480.1 Thale cress cytosol 73.26 74.25
CDY68009 Canola cytosol, endoplasmic reticulum, golgi 58.56 68.01
CDY72415 Canola cytosol, endoplasmic reticulum, peroxisome 57.49 66.15
CDY45844 Canola cytosol, golgi, peroxisome 56.15 64.62
TraesCS4A01G331600.1 Wheat cytosol, golgi, plastid 35.03 60.09
CDY14000 Canola cytosol 49.47 56.75
GSMUA_Achr8P24070_001 Banana golgi, plastid 48.66 56.35
GSMUA_Achr8P24060_001 Banana plastid 48.4 56.04
VIT_13s0067g00590.t01 Wine grape endoplasmic reticulum, golgi 48.66 55.66
GSMUA_Achr8P24040_001 Banana plastid 47.86 55.42
VIT_13s0067g00620.t01 Wine grape endoplasmic reticulum, golgi 48.4 55.35
CDX92530 Canola cytosol 48.66 55.15
CDY22576 Canola cytosol 47.33 54.46
CDY03618 Canola cytosol 47.06 54.15
CDY65726 Canola cytosol 47.06 54.15
CDY43911 Canola cytosol 46.79 53.85
Solyc01g087640.2.1 Tomato cytosol 46.79 53.35
GSMUA_Achr4P10200_001 Banana cytosol, golgi, plastid 46.79 53.35
TraesCS5D01G540800.1 Wheat plastid 47.06 53.33
TraesCS4A01G331900.2 Wheat golgi, unclear 47.06 53.33
TraesCS5B01G547200.1 Wheat unclear 45.99 52.12
TraesCS5B01G547000.1 Wheat golgi 45.99 52.12
Os01t0528800-01 Rice cytosol, endoplasmic reticulum, plastid 46.52 51.79
TraesCS5D01G541100.1 Wheat golgi 45.45 51.52
KXG30065 Sorghum plastid 45.99 51.5
HORVU5Hr1G122150.1 Barley plastid 47.33 49.17
TraesCS4D01G343400.1 Wheat cytosol 43.58 48.08
CDY35052 Canola cytosol 35.03 47.46
TraesCS5A01G517000.1 Wheat mitochondrion 44.38 45.98
Zm00001d015956_P002 Maize plastid 46.52 45.43
TraesCS5B01G546700.1 Wheat peroxisome, plastid 27.01 44.69
HORVU4Hr1G085100.1 Barley cytosol 44.38 44.62
CDX81743 Canola cytosol 40.11 44.12
CDY33365 Canola cytosol 40.37 44.02
CDY52857 Canola cytosol 40.11 43.73
CDY63972 Canola cytosol 38.5 43.5
CDX87345 Canola cytosol 38.24 43.07
CDY39941 Canola cytosol 38.24 43.07
CDY64860 Canola cytosol 37.97 42.9
CDY24810 Canola cytosol 35.03 41.32
CDX75502 Canola cytosol, extracellular, plastid 34.76 40.75
CDY57397 Canola cytosol, endoplasmic reticulum, peroxisome 34.76 40.25
CDY32979 Canola cytosol, endoplasmic reticulum, peroxisome 34.76 40.25
CDX69139 Canola cytosol, extracellular, plastid 34.22 40.13
CDY41656 Canola cytosol, plastid, vacuole 33.96 40.06
CDY38590 Canola cytosol 33.42 38.94
CDX69634 Canola cytosol 33.16 38.63
CDX96012 Canola cytosol, nucleus, peroxisome 32.89 38.32
CDY09372 Canola cytosol 31.02 36.14
CDY42105 Canola cytosol, plastid 30.48 35.51
CDX84989 Canola cytosol 30.48 35.51
CDY15830 Canola cytosol 30.21 35.2
CDX84988 Canola cytosol 27.27 33.44
CDY42108 Canola cytosol 17.38 27.66
Protein Annotations
EnsemblPlants:CDY64748EnsemblPlantsGene:GSBRNA2T00042667001Gene3D:3.40.50.720GO:A0A078JB22GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR10366PANTHER:PTHR10366:SF492
PFAM:PF01370ProteinID:CDY64748ProteinID:CDY64748.1SEG:segSUPFAM:SSF51735UniParc:UPI0004EF4884
UniProt:A0A078JB22MapMan:35.1::::
Description
BnaA06g37880DBnaA06g37880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JB22]
Coordinates
chrLK034541:-:11695..15148
Molecular Weight (calculated)
41888.3 Da
IEP (calculated)
6.307
GRAVY (calculated)
0.083
Length
374 amino acids
Sequence
(BLAST)
001: MFVTIIIGAK INKEIEYKVC VWRKCKNGFS TLLEETIGNT IFSLKDSRLL TKMNVGGKVV CVTGASGYIA SWIVKLLLLR GYTVRATVRN PTDAAKTEHL
101: LALEGAKERL KLFKADLLEE CSFEQAIECC DAVFHTASPV KFIVTNPQTE LIDPALKGTM NVLNTCKKTS SVKRVIVTSS MAAVIVRQPP LEPNDVVDES
201: FFSDPSVCME TEYWYPLSKT LAENVAWQFS KENGMDMVFI NPGFIIGPLL QPTLNFSVEM IVDMINGKNP FNSIYYRFVD VRDVALAHVK ALESPSANGR
301: YIMDGPSMTI YEIKEIMREL FPDLCVADTK EEGEIKEIIY KVCVEKVKNL GVEFTPLKSS LRDTIISLKE KCLV
Best Arabidopsis Sequence Match ( AT1G09480.1 )
(BLAST)
001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.