Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G09490.1 | Thale cress | golgi | 69.59 | 68.94 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 67.71 | 67.08 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 67.08 | 65.85 |
| TraesCS4A01G331600.1 | Wheat | cytosol, golgi, plastid | 41.38 | 60.55 |
| AT1G09480.1 | Thale cress | cytosol | 68.03 | 58.81 |
| VIT_13s0067g00590.t01 | Wine grape | endoplasmic reticulum, golgi | 58.93 | 57.49 |
| AT5G19440.1 | Thale cress | plastid | 57.99 | 56.75 |
| VIT_13s0067g00620.t01 | Wine grape | endoplasmic reticulum, golgi | 57.37 | 55.96 |
| GSMUA_Achr8P24070_001 | Banana | golgi, plastid | 56.43 | 55.73 |
| GSMUA_Achr8P24060_001 | Banana | plastid | 56.43 | 55.73 |
| Solyc01g087640.2.1 | Tomato | cytosol | 56.11 | 54.57 |
| GSMUA_Achr4P10200_001 | Banana | cytosol, golgi, plastid | 56.11 | 54.57 |
| GSMUA_Achr8P24040_001 | Banana | plastid | 55.17 | 54.49 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 54.86 | 53.85 |
| TraesCS5D01G540800.1 | Wheat | plastid | 55.49 | 53.64 |
| TraesCS4A01G331900.2 | Wheat | golgi, unclear | 55.17 | 53.33 |
| TraesCS5B01G547200.1 | Wheat | unclear | 54.86 | 53.03 |
| TraesCS5D01G541100.1 | Wheat | golgi | 54.55 | 52.73 |
| TraesCS5B01G547000.1 | Wheat | golgi | 54.23 | 52.42 |
| Os01t0528800-01 | Rice | cytosol, endoplasmic reticulum, plastid | 52.98 | 50.3 |
| HORVU5Hr1G122150.1 | Barley | plastid | 56.74 | 50.28 |
| KXG30065 | Sorghum | plastid | 52.04 | 49.7 |
| TraesCS4D01G343400.1 | Wheat | cytosol | 51.72 | 48.67 |
| TraesCS5A01G517000.1 | Wheat | mitochondrion | 52.66 | 46.54 |
| TraesCS5B01G546700.1 | Wheat | peroxisome, plastid | 32.92 | 46.46 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 47.65 | 45.78 |
| AT1G15950.1 | Thale cress | cytosol | 48.59 | 45.06 |
| Zm00001d015956_P002 | Maize | plastid | 52.98 | 44.13 |
| HORVU4Hr1G085100.1 | Barley | cytosol | 50.78 | 43.55 |
| AT4G35420.1 | Thale cress | extracellular | 42.95 | 42.02 |
| AT5G58490.1 | Thale cress | cytosol | 42.01 | 41.36 |
| AT1G68540.1 | Thale cress | cytosol | 37.93 | 37.69 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 35.74 | 35.74 |
| AT2G02400.1 | Thale cress | cytosol | 35.11 | 35.22 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:842998 | ProteinID:AEE34557.1 | ArrayExpress:AT1G66800 | EnsemblPlantsGene:AT1G66800 |
| RefSeq:AT1G66800 | TAIR:AT1G66800 | RefSeq:AT1G66800-TAIR-G | EnsemblPlants:AT1G66800.1 | TAIR:AT1G66800.1 | InterPro:Epimerase_deHydtase |
| UniProt:F4HQ07 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004022 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0050662 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_176852.2 | PFAM:PF01370 |
| PO:PO:0000084 | PO:PO:0000263 | PO:PO:0009005 | PO:PO:0020100 | PO:PO:0025195 | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF492 | SUPFAM:SSF51735 | UniParc:UPI0000197131 | : | : | : |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HQ07]
Coordinates
chr1:+:24924774..24926412
Molecular Weight (calculated)
35196.5 Da
IEP (calculated)
5.091
GRAVY (calculated)
0.007
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGEGKVVCV TGASGYIASW IVKLLLLRGY TVRATVRNPM DTKKTNHLLT LEGASERLKL FKSDLLEEGS FDQAIEGCDG VFHTASPVSL TVTDPQTEMI
101: DPAVNGTLNV LRTCAKVSSV KRVIVTSSTA ATLSINPNDV VDETVFTDLS VYLAMKAWYG YSKTLAEETA WRFAKENGID LVVMNPGNVI GPVLQPTLNY
201: SVEVIVDLIN GKNPSNSFYY RFMDVRDVSL AHIKAFEVPS ASGRYILADP DVTMKDIQKL LHELFPDLCR VDKDNENEVG EMAYKVCVDK LKSLGIEFTP
301: IKESLKDTVV SLKERCLLI
101: DPAVNGTLNV LRTCAKVSSV KRVIVTSSTA ATLSINPNDV VDETVFTDLS VYLAMKAWYG YSKTLAEETA WRFAKENGID LVVMNPGNVI GPVLQPTLNY
201: SVEVIVDLIN GKNPSNSFYY RFMDVRDVSL AHIKAFEVPS ASGRYILADP DVTMKDIQKL LHELFPDLCR VDKDNENEVG EMAYKVCVDK LKSLGIEFTP
301: IKESLKDTVV SLKERCLLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.