Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008822.1-P | Field mustard | cytosol | 78.82 | 92.0 |
| CDY38590 | Canola | cytosol | 91.28 | 91.28 |
| CDX69634 | Canola | cytosol | 91.28 | 91.28 |
| Bra004316.1-P | Field mustard | cytosol, nucleus, peroxisome | 90.34 | 90.34 |
| CDX96012 | Canola | cytosol, nucleus, peroxisome | 90.03 | 90.03 |
| KRH75363 | Soybean | cytosol | 73.52 | 73.98 |
| VIT_01s0011g03480.t01 | Wine grape | cytosol, plastid | 72.59 | 72.81 |
| AT1G25460.1 | Thale cress | cytosol, plastid | 72.27 | 72.73 |
| KRH49476 | Soybean | cytosol | 70.41 | 70.85 |
| Solyc01g068080.2.1 | Tomato | cytosol, extracellular, plastid | 69.78 | 70.0 |
| PGSC0003DMT400013318 | Potato | cytosol, extracellular, plastid | 69.78 | 70.0 |
| GSMUA_Achr6P09630_001 | Banana | cytosol | 66.36 | 66.56 |
| EES02561 | Sorghum | cytosol | 62.93 | 62.15 |
| TraesCS3B01G036600.1 | Wheat | cytosol | 62.31 | 60.79 |
| TraesCS3D01G033300.1 | Wheat | cytosol | 61.99 | 60.49 |
| TraesCS3A01G046700.1 | Wheat | cytosol | 61.68 | 60.18 |
| Os01t0127500-01 | Rice | cytosol | 60.12 | 57.27 |
| HORVU3Hr1G004270.1 | Barley | mitochondrion | 40.19 | 53.75 |
| AT4G35420.1 | Thale cress | extracellular | 46.11 | 45.4 |
| AT1G09510.1 | Thale cress | cytosol, plastid, vacuole | 40.81 | 40.68 |
| AT5G19440.1 | Thale cress | plastid | 40.5 | 39.88 |
| AT1G51410.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 40.19 | 39.69 |
| AT1G80820.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 39.88 | 38.55 |
| AT1G66800.1 | Thale cress | peroxisome, plasma membrane, plastid | 37.69 | 37.93 |
| AT1G15950.1 | Thale cress | cytosol | 40.19 | 37.5 |
| AT1G09490.1 | Thale cress | golgi | 37.07 | 36.96 |
| AT5G58490.1 | Thale cress | cytosol | 35.51 | 35.19 |
| AT1G09500.1 | Thale cress | endoplasmic reticulum | 34.58 | 34.15 |
| AT1G09480.1 | Thale cress | cytosol | 36.45 | 31.71 |
| AT2G02400.1 | Thale cress | cytosol | 31.15 | 31.45 |
Protein Annotations
| MapMan:21.8.1.5 | Gene3D:3.40.50.720 | EntrezGene:843183 | UniProt:A0A178W2A9 | ProteinID:AAG52392.1 | ProteinID:AEE34806.1 |
| ArrayExpress:AT1G68540 | EnsemblPlantsGene:AT1G68540 | RefSeq:AT1G68540 | TAIR:AT1G68540 | RefSeq:AT1G68540-TAIR-G | EnsemblPlants:AT1G68540.1 |
| TAIR:AT1G68540.1 | EMBL:BT028984 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010584 |
| GO:GO:0016043 | GO:GO:0016491 | GO:GO:0050662 | GO:GO:0055114 | GO:GO:0080110 | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_177021.1 | ProteinID:OAP12649.1 | PFAM:PF01370 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009071 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF503 | UniProt:Q9CA28 |
| SUPFAM:SSF51735 | UniParc:UPI0000048425 | : | : | : | : |
Description
TKPR2TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9]
Coordinates
chr1:+:25719958..25721549
Molecular Weight (calculated)
35667.7 Da
IEP (calculated)
6.423
GRAVY (calculated)
-0.159
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEYLVTGGT GFIASYIIKS LLELGHTVRT TVRNPRDEEK VGFLWEFQGA KQRLKILQAD LTVEGSFDEA VNGVDGVFHT ASPVLVPQDH NIQETLVDPI
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L
101: IKGTTNVMSS CAKSKATLKR IVLTSSCSSI RYRFDATEAS PLNESHWSDP EYCKRFNLWY GYAKTLGERE AWRIAEEKGL DLVVVNPSFV VGPLLGPKPT
201: STLLMILAIA KGLAGEYPNF TVGFVHIDDV VAAHVLAMEE PKASGRIICS SSVAHWSEII ELMRNKYPNY PFENKCSNKE GDNSPHSMDT RKIHELGFGS
301: FKSLPEMFDD CIISFQKKGL L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.