Factsheet for TraesCS6D01G369500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G420900.1	Wheat	peroxisome	91.81	91.55
TraesCS6A01G380800.1	Wheat	cytosol	82.46	82.94
TraesCS6D01G365700.1	Wheat	cytosol	75.73	75.07
Os02t0808800-01	Rice	cytosol	73.39	74.26
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	79.82	74.18
Os02t0811400-00	Rice	cytosol	73.1	74.18
TraesCS6D01G366200.1	Wheat	cytosol	74.56	73.91
EES05992	Sorghum	cytosol	69.88	72.21
TraesCS6D01G365900.1	Wheat	cytosol	70.76	71.6
OQU85928	Sorghum	cytosol	69.59	69.39
TraesCS6D01G366400.1	Wheat	cytosol	65.79	67.57
Os02t0811800-01	Rice	cytosol	64.33	64.9
Zm00001d051938_P002	Maize	cytosol	70.18	64.86
TraesCS6D01G366000.1	Wheat	cytosol	72.51	64.42
Os02t0811600-00	Rice	cytosol	52.63	61.43
TraesCS7D01G150500.1	Wheat	cytosol	55.85	56.01
TraesCS7D01G150600.1	Wheat	cytosol	55.85	55.69
TraesCS5D01G232400.1	Wheat	cytosol, peroxisome, plastid	55.85	54.42
TraesCS5D01G073300.1	Wheat	cytosol	48.54	49.4
TraesCS5D01G073400.1	Wheat	cytosol	48.83	49.26
TraesCS6D01G136600.2	Wheat	extracellular, vacuole	47.95	47.67
TraesCS5D01G168400.1	Wheat	cytosol	49.42	47.34
TraesCS5D01G541100.1	Wheat	golgi	41.52	43.03
TraesCS5D01G540800.1	Wheat	plastid	39.47	40.91
TraesCS5D01G486300.2	Wheat	cytosol	38.89	40.3
TraesCS4D01G343400.1	Wheat	cytosol	39.77	40.12
TraesCS7D01G248800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	37.72	39.21
TraesCS5D01G278800.1	Wheat	mitochondrion	37.72	37.07
TraesCS3D01G342200.2	Wheat	cytosol	36.84	36.73
TraesCS3D01G033300.1	Wheat	cytosol	34.5	35.87

Protein Annotations

EnsemblPlants:TraesCS6D01G369500.1	EnsemblPlantsGene:TraesCS6D01G369500	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:	:

Description

No Description!

Coordinates

chr6D:+:456251602..456253234

Molecular Weight (calculated)

37562.2 Da

IEP (calculated)

7.759

GRAVY (calculated)

-0.113

Length

342 amino acids

Sequence
(BLAST)

001: MASYSEKQAN GIGEKHHDLV CVTGAGGFIG SWVVKALLLR GYRVRGTARD PADHKNAHLL ALEGAKERLS LCRANLLDRD NLIAVFSGCH GVFHIASPIS
101: NTDPDLMVVA VEGTKNVINA AADAGVQRVV FTSSYGAVHM DPNRSSDAVL DESCWSDYEF CEQTGNLYCC SKIMAEITAK EEAAKRGLEL AVVLPSMTIG
201: PALQQKLNLG ISHIIRYVTG AKKTYRNAIT AYVDVREVAR AHVLVYERPD ARGRYLCIGA VVHRADLVQL LGDLFPEYQI TAKCEDDGKP MARPYRFSNQ
301: RLRDLGLEFT PLRQTLYDTV VSLQQQGHLL LPAVPGPERA RL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.