Factsheet for Bra024744.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42105	Canola	cytosol, plastid	88.15	99.69
Bra024747.1-P	Field mustard	extracellular	54.27	83.47
AT1G25460.1	Thale cress	cytosol, plastid	73.28	83.39
Bra008822.1-P	Field mustard	cytosol	53.99	71.27
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	61.71	69.78
KRH75363	Soybean	cytosol	57.85	65.83
VIT_01s0011g03480.t01	Wine grape	cytosol, plastid	57.02	64.69
Solyc01g068080.2.1	Tomato	cytosol, extracellular, plastid	55.92	63.44
PGSC0003DMT400013318	Potato	cytosol, extracellular, plastid	55.37	62.81
KRH49476	Soybean	cytosol	55.1	62.7
GSMUA_Achr6P09630_001	Banana	cytosol	52.07	59.06
EES02561	Sorghum	cytosol	51.52	57.54
TraesCS3A01G046700.1	Wheat	cytosol	51.24	56.53
TraesCS3B01G036600.1	Wheat	cytosol	50.96	56.23
TraesCS3D01G033300.1	Wheat	cytosol	50.69	55.93
Os01t0127500-01	Rice	cytosol	49.31	53.12
HORVU3Hr1G004270.1	Barley	mitochondrion	34.44	52.08
Bra010535.1-P	Field mustard	cytosol	35.54	41.61
Bra030440.1-P	Field mustard	cytosol	34.16	38.15
Bra023231.1-P	Field mustard	cytosol	33.88	37.85
Bra014263.1-P	Field mustard	cytosol	33.88	37.85
Bra002236.1-P	Field mustard	cytosol	33.88	37.27
Bra026090.1-P	Field mustard	cytosol	34.16	36.36
Bra035150.1-P	Field mustard	cytosol	33.06	36.14
Bra026737.1-P	Field mustard	cytosol	33.88	35.86
Bra008438.1-P	Field mustard	cytosol	32.23	35.35
Bra020019.1-P	Field mustard	extracellular, golgi	31.68	35.28
Bra020021.1-P	Field mustard	golgi	31.13	35.09
Bra020020.1-P	Field mustard	extracellular, golgi	31.13	35.09
Bra031666.1-P	Field mustard	golgi	30.3	34.81
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	30.85	34.46
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	29.75	33.44
Bra026600.1-P	Field mustard	cytosol	27.27	30.84

Protein Annotations

EnsemblPlants:Bra024744.1	EnsemblPlants:Bra024744.1-P	EnsemblPlantsGene:Bra024744	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF503
PFAM:PF01370	SUPFAM:SSF51735	UniParc:UPI000254272E	UniProt:M4E7I9	MapMan:21.8.1.5	:

Description

AT1G25460 (E=1e-154) | oxidoreductase family protein

Coordinates

chrA09:+:23113374..23114870

Molecular Weight (calculated)

40461.3 Da

IEP (calculated)

5.342

GRAVY (calculated)

-0.257

Length

363 amino acids

Sequence
(BLAST)

001: MVDDLTCCRK CVGSKKSQPE TELDSDCESS NQNRGTVLNN IKMGEYLVTG GTSFIASHVV KALLDLGHSV RTTVRDSSDE EKVRFLWELK GAKERLKIFE
101: ADLTVEGSFD EAVKGVDGVF HIASRVTVCL DKNDLEKLVD RDINGTRNLM NSCEKSRNTV KRIVLTSSST AVRYRYDATE ASPLNESHYS DLDYCRNFKI
201: WYGYAKTLGE KEAWTIAAEK NLDLVVVIPS FCIGPILSPE PTSSPLILLS IIKGVRGDYP NVTGGFVHIE DVVAAQILAM EEPKASGRFI CSSSVAHWSE
301: IIEMLRPKYP LYPFETKCSS EEGKDMPHSL DTTKIRELGL PPFKSLAEMF DDCIKCFQDK GLL

Best Arabidopsis Sequence Match ( AT1G25460.1 )
(BLAST)

001: MAEYLVTGGT SFIASHVIKS LLEFGHYVRT TVRDSDEEKV GFLWDLKGAK ERLKIFEADL TIEGSFDEAV NGVDGVFHIA SRVSVRLDNN NLDKFDPNIS
101: GTMNVMNSCA KSRNTVKRIV LTSSSTAIRY RFDATQVSPL NESHWTDLEY CKHFKIWYAY KKTLGEKEAW RIAADKKLNL VVVIPSFCIG PILSPKPTSS
201: PLIFLSIIKG TRGTYPNFRG GFVHIDDVVA AQILAMEEPK ASGRILCSSS VAHWSEIIEM LRIKYPLYPF ETKCGSEEGK DMPHSLDTTK IHELGFASFK
301: SLTEMFDDCI KCFQDKGLL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G25460]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.