Factsheet for Bra002236.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92530	Canola	cytosol	99.09	99.09
AT5G19440.1	Thale cress	plastid	88.79	89.88
Bra023231.1-P	Field mustard	cytosol	74.55	75.69
Bra014263.1-P	Field mustard	cytosol	74.55	75.69
Bra030440.1-P	Field mustard	cytosol	74.24	75.38
Bra031666.1-P	Field mustard	golgi	56.67	59.18
Bra038342.1-P	Field mustard	cytosol, golgi, peroxisome	56.06	56.92
Bra020021.1-P	Field mustard	golgi	54.24	55.59
Bra020019.1-P	Field mustard	extracellular, golgi	54.85	55.52
Bra020020.1-P	Field mustard	extracellular, golgi	52.73	54.04
Bra026090.1-P	Field mustard	cytosol	49.39	47.8
Bra026737.1-P	Field mustard	cytosol	49.39	47.52
Bra008438.1-P	Field mustard	cytosol	47.58	47.43
Bra035150.1-P	Field mustard	cytosol	47.27	46.99
Bra002645.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	45.76	46.75
Bra010535.1-P	Field mustard	cytosol	42.12	44.84
Bra008822.1-P	Field mustard	cytosol	37.27	44.73
Bra004316.1-P	Field mustard	cytosol, nucleus, peroxisome	40.0	41.12
Bra026600.1-P	Field mustard	cytosol	38.79	39.88
Bra024747.1-P	Field mustard	extracellular	24.85	34.75
Bra024744.1-P	Field mustard	cytosol	37.27	33.88

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra002236	EnsemblPlants:Bra002236.1	EnsemblPlants:Bra002236.1-P	InterPro:Epimerase_deHydtase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0005886	GO:GO:0009506	GO:GO:0016020
GO:GO:0050662	UniProt:M4CDF5	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01370	PANTHER:PTHR10366	PANTHER:PTHR10366:SF407
SUPFAM:SSF51735	UniParc:UPI0002545182	:	:	:	:

Description

AT5G19440 (E=7e-172) | cinnamyl-alcohol dehydrogenase, putative (CAD)

Coordinates

chrA10:-:10736734..10738309

Molecular Weight (calculated)

36176.2 Da

IEP (calculated)

6.625

GRAVY (calculated)

-0.100

Length

330 amino acids

Sequence
(BLAST)

001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLDGAKERL HLFKADLLEE GSFDSAIDGC EGVFHTASPF YHDVKDPQAE
101: LIDPAVKGTL NVLNSCTKAS SVKRVVVTSS MAAVAYNGKP RTPDVTVDET WFSDPEVCKT SKMWYVLSKT LAEDAAWKFA KEKDLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNFINGAKT FSNSTFGWVN VKDVANAHIQ AYEVPSANGR YCMVERVLHH SEIVNILRQL YPNLQLPESC ADENPFVPTY QVSKEKIKSI
301: GIDYIPLEVS IKETVESLKE KGFINVRASI

Best Arabidopsis Sequence Match ( AT5G19440.1 )
(BLAST)

001: MANSGEGKVV CVTGASGYIA SWLVKFLLSR GYTVKASVRD PSDPKKTQHL VSLEGAKERL HLFKADLLEQ GSFDSAIDGC HGVFHTASPF FNDAKDPQAE
101: LIDPAVKGTL NVLNSCAKAS SVKRVVVTSS MAAVGYNGKP RTPDVTVDET WFSDPELCEA SKMWYVLSKT LAEDAAWKLA KEKGLDIVTI NPAMVIGPLL
201: QPTLNTSAAA ILNLINGAKT FPNLSFGWVN VKDVANAHIQ AFEVPSANGR YCLVERVVHH SEIVNILREL YPNLPLPERC VDENPYVPTY QVSKDKTRSL
301: GIDYIPLKVS IKETVESLKE KGFAQF

Arabidopsis Description

At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.