Factsheet for HORVU6Hr1G089340.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G365700.1	Wheat	cytosol	83.16	93.04
TraesCS6B01G420000.1	Wheat	cytosol	82.64	92.46
TraesCS6A01G381400.1	Wheat	cytosol	82.64	92.46
TraesCS6D01G366200.1	Wheat	cytosol	82.38	92.17
TraesCS6B01G420200.1	Wheat	cytosol	82.12	91.88
TraesCS6A01G381100.1	Wheat	cytosol	60.62	83.87
TraesCS6D01G366000.1	Wheat	cytosol	80.31	80.52
Os02t0811400-00	Rice	cytosol	70.21	80.42
Os02t0808800-01	Rice	cytosol	70.21	80.18
EES05992	Sorghum	cytosol	68.13	79.46
TraesCS6A01G380900.1	Wheat	cytosol	76.94	77.34
OQU85928	Sorghum	cytosol	67.88	76.38
Os02t0811800-01	Rice	cytosol	63.47	72.27
HORVU6Hr1G089460.2	Barley	cytosol	66.06	71.43
Zm00001d051938_P002	Maize	cytosol	68.39	71.35
HORVU6Hr1G089350.2	Barley	cytosol, peroxisome	66.84	70.11
Os02t0811600-00	Rice	cytosol	51.04	67.24
HORVU7Hr1G030380.2	Barley	cytosol	49.48	56.01
HORVU7Hr1G022220.4	Barley	cytosol	48.45	55.0
HORVU0Hr1G013070.1	Barley	cytosol	44.56	50.15
HORVU5Hr1G065330.5	Barley	cytosol, peroxisome, plastid	48.7	49.74
HORVU5Hr1G050940.1	Barley	cytosol	45.08	48.6
HORVU6Hr1G028980.18	Barley	endoplasmic reticulum, extracellular	42.75	47.83
HORVU5Hr1G016690.3	Barley	cytosol	42.49	45.43
HORVU5Hr1G016620.2	Barley	cytosol	42.23	45.28
HORVU3Hr1G088020.2	Barley	cytosol	32.38	38.23
HORVU5Hr1G122150.1	Barley	plastid	35.23	37.78
HORVU4Hr1G085100.1	Barley	cytosol	34.97	36.29
HORVU5Hr1G112340.7	Barley	cytosol, plastid	34.72	35.73
HORVU3Hr1G004270.1	Barley	mitochondrion	19.43	31.25
HORVU5Hr1G016670.3	Barley	plastid	1.55	14.29

Protein Annotations

EnsemblPlants:HORVU6Hr1G089340.1	EnsemblPlantsGene:HORVU6Hr1G089340	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000B46235E	UniProt:A0A287V498	MapMan:21.6.1.5	:

Description

No Description!

Coordinates

chrchr6H:+:569076912..569078942

Molecular Weight (calculated)

42698.3 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.224

Length

386 amino acids

Sequence
(BLAST)

001: MYRSHSSINK QQRQIATSPV QSSSKSFLRP HIDRPPCSSV TMPSIDVATE DGEMKQRQPE QELVCVTGAG GFIGSWVVKE LLLRGYRVRG TARDPADRKN
101: AHLLALEGAE ERLTLCRADV LDYDGLRAAF CGCHGVFHVA SPVSNDPDLV PVAVEGTRNV IRAVADAGVR RVVFTSSYGA VHMDPNRSPD AVLDEACWSD
201: YDFCKNTGNL YCCAKMMAEI TATEEAAKRG LELAVVVPSM TMGPMLQQSL NFSSSHVARY LTGAKSIYPN AVAAYTDVRD VARAHVLVYE HPDARGRYLC
301: IGAVLHRTHF LQLLGDLFPQ YHITAKCEED GKPMAKPYKF SNRRLRELGL EFTPLKESLY ETVTCLQKKG HLPLPVVPVA QKRAYL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.