Factsheet for TraesCS6A01G381400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G366200.1	Wheat	cytosol	92.17	92.17
TraesCS6B01G420200.1	Wheat	cytosol	92.17	92.17
TraesCS6A01G381100.1	Wheat	cytosol	68.12	84.23
HORVU6Hr1G089340.1	Barley	mitochondrion	92.46	82.64
Os02t0808800-01	Rice	cytosol	78.26	79.88
Os02t0811400-00	Rice	cytosol	77.97	79.82
EES05992	Sorghum	cytosol	75.94	79.15
TraesCS6A01G380900.1	Wheat	cytosol	85.8	77.08
OQU85928	Sorghum	cytosol	74.2	74.64
TraesCS6A01G380800.1	Wheat	cytosol	73.04	74.12
Os02t0811800-01	Rice	cytosol	71.01	72.27
TraesCS5A01G410100.1	Wheat	cytosol	68.12	70.15
Zm00001d051938_P002	Maize	cytosol	75.07	70.0
TraesCS5A01G410400.1	Wheat	cytosol	67.83	69.23
Os02t0811600-00	Rice	cytosol	57.1	67.24
TraesCS6A01G381700.1	Wheat	golgi, mitochondrion	72.75	66.58
TraesCS5A01G225100.3	Wheat	cytosol, plastid	55.07	54.6
TraesCS7A01G149000.1	Wheat	cytosol	53.91	53.91
TraesCS5A01G061700.1	Wheat	cytosol	49.28	50.15
TraesCS5A01G163400.1	Wheat	cytosol	51.3	49.58
TraesCS5A01G061600.1	Wheat	cytosol, mitochondrion, peroxisome	48.12	49.4
TraesCS4A01G331600.1	Wheat	cytosol, golgi, plastid	27.25	43.12
TraesCS5A01G061800.1	Wheat	cytosol	34.2	42.29
TraesCS5A01G473600.1	Wheat	cytosol	39.42	41.21
TraesCS4A01G331900.2	Wheat	golgi, unclear	38.84	40.61
TraesCS6A01G147300.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	49.28	39.91
TraesCS3A01G046700.1	Wheat	cytosol	36.81	38.6
TraesCS3A01G348600.1	Wheat	cytosol	35.36	37.2
TraesCS5A01G517000.1	Wheat	mitochondrion	38.55	36.84
TraesCS5A01G271200.1	Wheat	mitochondrion	36.52	36.21
TraesCS7A01G250100.1	Wheat	cytosol, mitochondrion, plastid	35.36	32.45

Protein Annotations

EnsemblPlants:TraesCS6A01G381400.1	EnsemblPlantsGene:TraesCS6A01G381400	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF353	PFAM:PF01370
SEG:seg	SUPFAM:SSF51735	TIGR:cd08958	MapMan:21.6.1.5	:	:

Description

No Description!

Coordinates

chr6A:+:601146836..601148224

Molecular Weight (calculated)

38040.9 Da

IEP (calculated)

8.257

GRAVY (calculated)

-0.192

Length

345 amino acids

Sequence
(BLAST)

001: MPSIGKATDN GEMKQRRPEQ ELVCVTGAGG FIGSWVVKEL LLRGYRVRGT ARDPADRKNA HLLALEGAEE RLTLCRADVL DYDGLHAAFR GCQGVFHVAS
101: PVSNDPDLVP VAVEGTKNVI RAAADAGVRR VVFTSSYGTV HMNPNRGPDA VLDESCWSDY DFCKNTGNLY CCAKMMAEIT ATEEAAKRGL ELAVVVPSMT
201: MGPMLQQTLN FSSSHVARYL TGAKPTYPNA VAAYTDVRDV ARAHILVYEH PNARGRYLCI GAVLHRAHFL QLLGDLFSQY HITAKCEDDG KPMAKPYKFS
301: NLRLRELGLE FTPLRESLYE TVTCLQKKGH LPLPVVPITQ KRAYL

Best Arabidopsis Sequence Match ( AT1G15950.1 )
(BLAST)

001: MPVDVASPAG KTVCVTGAGG YIASWIVKIL LERGYTVKGT VRNPDDPKNT HLRELEGGKE RLILCKADLQ DYEALKAAID GCDGVFHTAS PVTDDPEQMV
101: EPAVNGAKFV INAAAEAKVK RVVITSSIGA VYMDPNRDPE AVVDESCWSD LDFCKNTKNW YCYGKMVAEQ AAWETAKEKG VDLVVLNPVL VLGPPLQPTI
201: NASLYHVLKY LTGSAKTYAN LTQAYVDVRD VALAHVLVYE APSASGRYLL AESARHRGEV VEILAKLFPE YPLPTKCKDE KNPRAKPYKF TNQKIKDLGL
301: EFTSTKQSLY DTVKSLQEKG HLAPPPPPPS ASQESVENGI KIGS

Arabidopsis Description

CCR1Cinnamoyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9N9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.