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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14615 Canola cytosol 96.35 96.35
CDX68016 Canola cytosol 83.11 83.11
AT1G78380.1 Thale cress cytosol 82.65 82.65
CDX79261 Canola cytosol 82.65 82.65
CDX79258 Canola cytosol 39.73 77.68
CDY21758 Canola cytosol 74.43 74.43
CDX81808 Canola cytosol 73.06 73.06
CDY21757 Canola cytosol 71.69 71.69
CDX81810 Canola cytosol 71.23 71.23
CDY48476 Canola cytosol 70.78 70.78
CDX81809 Canola cytosol 70.32 70.32
CDY26266 Canola cytosol 70.32 70.32
CDX68018 Canola cytosol 69.86 70.18
CDX87452 Canola cytosol 70.32 70.0
CDX79260 Canola cytosol 68.95 69.59
CDY21756 Canola cytosol 69.41 69.41
CDX79259 Canola cytosol 69.41 69.41
CDX68017 Canola cytosol 68.49 69.12
CDX88440 Canola cytosol 68.95 68.64
CDX88441 Canola cytosol 68.95 68.33
CDX81807 Canola cytosol 67.58 67.89
KRH43843 Soybean cytosol 67.58 67.58
CDY26267 Canola cytosol 66.21 67.44
CDX68019 Canola cytosol 66.67 66.36
CDY48475 Canola cytosol 50.68 65.68
CDX88439 Canola cytosol 65.3 65.6
CDX88438 Canola cytosol 65.3 65.6
KRH13622 Soybean cytosol 51.14 65.5
CDX96787 Canola cytosol 63.93 63.93
CDX83922 Canola cytosol 63.93 63.93
Solyc12g011310.1.1 Tomato plastid 63.01 63.01
Solyc07g056490.2.1 Tomato extracellular 62.1 62.1
CDY58045 Canola cytosol 63.01 61.61
CDY25833 Canola cytosol 63.01 61.61
PGSC0003DMT400071059 Potato cytosol 61.64 61.36
KRH43845 Soybean cytosol 62.1 61.26
VIT_10s0003g04250.t01 Wine grape cytosol 26.48 61.05
PGSC0003DMT400038054 Potato endoplasmic reticulum 60.73 60.73
KRH13625 Soybean cytosol 60.73 60.73
CDY25831 Canola cytosol 62.1 60.71
CDY48477 Canola cytosol 52.05 59.69
VIT_19s0093g00370.t01 Wine grape cytosol 32.42 58.68
VIT_19s0093g00350.t01 Wine grape cytosol 57.53 57.01
VIT_19s0093g00400.t01 Wine grape cytosol 56.62 56.11
KRH13620 Soybean cytosol 56.62 56.11
KRH02498 Soybean cytosol 55.71 55.96
VIT_19s0093g00320.t01 Wine grape cytosol 56.16 55.66
KRH43846 Soybean cytosol 49.77 53.43
CDX87952 Canola cytosol 53.88 51.98
CDY12324 Canola cytosol 53.88 51.98
CDY45140 Canola cytosol 27.85 48.03
CDY07793 Canola cytosol 32.88 45.0
CDX68020 Canola cytosol 6.85 41.67
CDY45138 Canola cytosol 41.1 40.54
CDY34896 Canola cytosol 42.01 40.53
CDX77247 Canola cytosol 41.1 40.18
CDY30898 Canola cytosol 42.47 39.74
CDY56090 Canola mitochondrion 37.44 39.42
CDY16220 Canola cytosol 40.64 39.21
CDY14704 Canola cytosol 40.18 38.6
CDY30896 Canola cytosol 40.64 38.53
CDX93432 Canola cytosol 39.73 38.33
CDY37984 Canola cytosol 39.73 38.33
CDY40288 Canola cytosol, plastid 39.27 37.89
CDY37985 Canola cytosol 39.27 37.89
CDY65968 Canola cytosol 38.36 36.52
CDY11636 Canola mitochondrion 37.9 36.09
CDY11637 Canola mitochondrion 37.44 35.96
CDY38773 Canola cytosol 37.44 35.96
CDY11635 Canola cytosol 38.36 35.9
CDY38775 Canola cytosol 38.36 35.9
CDY56091 Canola cytosol 37.44 35.65
CDY28452 Canola cytosol 31.51 35.2
CDY48383 Canola cytosol 37.44 35.04
CDY23533 Canola cytosol 37.44 35.04
CDY25824 Canola cytosol 31.51 34.33
CDY38774 Canola cytosol 37.9 32.55
CDY23534 Canola cytosol, mitochondrion, plastid 21.0 25.14
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10UniProt:A0A078GNE9EnsemblPlants:CDY26861ProteinID:CDY26861
ProteinID:CDY26861.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00036530001InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410
PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EEC87BSEG:seg:::
Description
BnaA02g18860DBnaA02g18860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNE9]
Coordinates
chrLK032195:-:261957..263172
Molecular Weight (calculated)
25864.1 Da
IEP (calculated)
5.476
GRAVY (calculated)
-0.483
Length
219 amino acids
Sequence
(BLAST)
001: MANEVILLDF WPSMFGMRTR IALREKGIEF EYRDEDLWNK SPLLLETNPV HKKIPVLIHN GKPVCESTIQ VQYIDEVWSD KNPILPSDPY QRAQARFWVD
101: FIDKKMYDAQ RKVWWTKGEE QETGKKEFIE LLKTLESELR DKTYFGGDDF GYVDIGLIGF YSWFHACEKY GNLNIESECP KLIAWAKTCM QRESVAKSLP
201: DSEKVIKFVT EIRKKFMIE
Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)
001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE
Arabidopsis Description
GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.