Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43846 | Soybean | cytosol | 79.19 | 85.78 |
| KRH13622 | Soybean | cytosol | 49.32 | 63.74 |
| KRH13617 | Soybean | cytosol, nucleus | 62.9 | 63.47 |
| Solyc12g011310.1.1 | Tomato | plastid | 62.44 | 63.01 |
| PGSC0003DMT400038054 | Potato | endoplasmic reticulum | 61.99 | 62.56 |
| KRH13616 | Soybean | cytosol | 60.63 | 62.04 |
| Solyc07g056490.2.1 | Tomato | extracellular | 61.09 | 61.64 |
| KRH43848 | Soybean | cytosol | 61.09 | 61.64 |
| KRH43843 | Soybean | cytosol | 60.63 | 61.19 |
| KRH02498 | Soybean | cytosol | 60.18 | 61.01 |
| KRG98126 | Soybean | cytosol | 26.7 | 59.6 |
| KRH43845 | Soybean | cytosol | 59.73 | 59.46 |
| AT1G78380.1 | Thale cress | cytosol | 58.37 | 58.9 |
| AT1G78360.1 | Thale cress | endoplasmic reticulum | 57.47 | 57.73 |
| PGSC0003DMT400071059 | Potato | cytosol | 57.47 | 57.73 |
| KRH13625 | Soybean | cytosol | 57.01 | 57.53 |
| KRH30655 | Soybean | cytosol | 57.47 | 57.47 |
| Bra003645.1-P | Field mustard | cytosol | 52.94 | 57.35 |
| CDY14615 | Canola | cytosol | 56.56 | 57.08 |
| CDX68016 | Canola | cytosol | 56.56 | 57.08 |
| Bra003644.1-P | Field mustard | cytosol | 56.56 | 57.08 |
| KRH43847 | Soybean | cytosol | 53.39 | 57.0 |
| Bra025995.1-P | Field mustard | cytosol | 55.2 | 56.74 |
| CDY21758 | Canola | cytosol | 56.11 | 56.62 |
| KRH13619 | Soybean | cytosol | 56.11 | 56.62 |
| CDX79261 | Canola | cytosol | 56.11 | 56.62 |
| CDY26861 | Canola | cytosol | 56.11 | 56.62 |
| Bra026684.1-P | Field mustard | cytosol | 56.11 | 56.62 |
| Bra026681.1-P | Field mustard | cytosol | 56.11 | 56.62 |
| CDY26266 | Canola | cytosol | 55.66 | 56.16 |
| Bra025994.1-P | Field mustard | cytosol | 55.66 | 56.16 |
| AT1G17180.1 | Thale cress | cytosol | 56.11 | 56.11 |
| CDX88441 | Canola | cytosol | 56.11 | 56.11 |
| CDX87452 | Canola | cytosol | 55.66 | 55.91 |
| Bra035031.1-P | Field mustard | cytosol | 55.66 | 55.91 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 23.98 | 55.79 |
| Bra026680.1-P | Field mustard | cytosol | 55.2 | 55.71 |
| CDY48476 | Canola | cytosol | 55.2 | 55.71 |
| Bra016615.1-P | Field mustard | cytosol | 55.2 | 55.71 |
| CDX96787 | Canola | cytosol | 55.2 | 55.71 |
| CDX83922 | Canola | cytosol | 55.2 | 55.71 |
| CDX81808 | Canola | cytosol | 55.2 | 55.71 |
| CDX81810 | Canola | cytosol | 55.2 | 55.71 |
| AT1G17170.1 | Thale cress | cytosol | 54.75 | 55.5 |
| CDX68017 | Canola | cytosol | 54.3 | 55.3 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 55.2 | 55.2 |
| CDX81807 | Canola | cytosol | 54.3 | 55.05 |
| CDY48475 | Canola | cytosol | 42.08 | 55.03 |
| CDY26267 | Canola | cytosol | 53.39 | 54.88 |
| AT1G78370.1 | Thale cress | cytosol | 53.85 | 54.84 |
| CDX79260 | Canola | cytosol | 53.85 | 54.84 |
| Bra026679.1-P | Field mustard | cytosol | 54.3 | 54.79 |
| CDY21757 | Canola | cytosol | 54.3 | 54.79 |
| CDY21756 | Canola | cytosol | 53.85 | 54.34 |
| CDX81809 | Canola | cytosol | 53.85 | 54.34 |
| CDX88440 | Canola | cytosol | 53.85 | 54.09 |
| AT1G17190.1 | Thale cress | cytosol | 53.85 | 54.09 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 53.85 | 53.85 |
| Bra025993.1-P | Field mustard | cytosol | 53.39 | 53.64 |
| KRH43842 | Soybean | cytosol | 37.1 | 53.25 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 28.96 | 52.89 |
| KRH13618 | Soybean | extracellular | 52.49 | 52.73 |
| CDY48477 | Canola | cytosol | 44.8 | 51.83 |
| AT1G78340.1 | Thale cress | cytosol | 50.68 | 51.38 |
| CDX68018 | Canola | cytosol | 50.68 | 51.38 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 51.13 | 51.13 |
| CDX88439 | Canola | cytosol | 50.23 | 50.92 |
| CDX88438 | Canola | cytosol | 50.23 | 50.92 |
| Bra035029.1-P | Field mustard | cytosol | 50.23 | 50.92 |
| Bra003646.1-P | Field mustard | cytosol | 50.23 | 50.92 |
| CDX79259 | Canola | cytosol | 49.77 | 50.23 |
| CDX87952 | Canola | cytosol | 50.68 | 49.34 |
| AT3G43800.1 | Thale cress | cytosol | 50.23 | 48.9 |
| Bra034977.1-P | Field mustard | cytosol | 50.23 | 48.9 |
| CDY12324 | Canola | cytosol | 50.23 | 48.9 |
| KRH72918 | Soybean | cytosol | 48.87 | 48.87 |
| KRH17272 | Soybean | cytosol | 48.87 | 48.87 |
| Bra003648.1-P | Field mustard | cytosol | 29.41 | 43.62 |
| KRH69403 | Soybean | extracellular | 24.43 | 40.3 |
| KRH69404 | Soybean | nucleus | 38.46 | 36.64 |
| KRH74740 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 38.91 | 36.6 |
| KRH69402 | Soybean | nucleus | 38.01 | 36.21 |
| KRH74742 | Soybean | nucleus | 38.01 | 35.9 |
| KRG99195 | Soybean | cytosol | 22.62 | 35.21 |
| CDX68020 | Canola | cytosol | 3.62 | 22.22 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EntrezGene:548030 | EMBL:ACUP02009764 | EMBL:AF243371 |
| EnsemblPlantsGene:GLYMA_15G251900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006749 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019748 |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | EMBL:KM818463 |
| EnsemblPlants:KRH13620 | ProteinID:KRH13620 | ProteinID:KRH13620.1 | ProteinID:KRH13621.1 | PFAM:PF02798 | PFAM:PF13410 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | UniProt:Q9FQE2 | SUPFAM:SSF47616 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000009EA45 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:48002286..48003824
Molecular Weight (calculated)
25985.3 Da
IEP (calculated)
5.218
GRAVY (calculated)
-0.324
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEAKVVLL GARFSMFEMR VKIALAEKGI KYEYMEQDLT NKSTLLQEMN PIHKKIPVLI HHGRPICESL IIVEYIDMVW DNNCPLLPSD PYHKAQARFW
101: ADFVDQKVYH ASKRVWISKG DEKEVAKKDF LESLKQLEEF LGDKPYFGGD TFGFVDVALI PFYCWFYTYE TFGNFKVEGE YPKLISWAKR CMQKESVSET
201: LADEREVYEA VLDYKNKFIL N
101: ADFVDQKVYH ASKRVWISKG DEKEVAKKDF LESLKQLEEF LGDKPYFGGD TFGFVDVALI PFYCWFYTYE TFGNFKVEGE YPKLISWAKR CMQKESVSET
201: LADEREVYEA VLDYKNKFIL N
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.