CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43847	Soybean	cytosol	82.19	86.96
KRH13618	Soybean	extracellular	73.97	73.64
KRH13617	Soybean	cytosol, nucleus	67.58	67.58
KRG98126	Soybean	cytosol	30.14	66.67
KRH43848	Soybean	cytosol	64.84	64.84
KRH13616	Soybean	cytosol	63.47	64.35
KRH13620	Soybean	cytosol	56.62	56.11
KRH02498	Soybean	cytosol	55.71	55.96
KRH43843	Soybean	cytosol	55.71	55.71
KRH13625	Soybean	cytosol	54.34	54.34
KRH13622	Soybean	cytosol	42.01	53.8
KRH30655	Soybean	cytosol	53.42	52.94
KRH43845	Soybean	cytosol	53.42	52.7
KRH43846	Soybean	cytosol	48.86	52.45
KRH43842	Soybean	cytosol	32.88	46.75
KRH72918	Soybean	cytosol	47.03	46.61
KRH17272	Soybean	cytosol	47.03	46.61
KRH69403	Soybean	extracellular	26.94	44.03
KRG99195	Soybean	cytosol	25.57	39.44
KRH74740	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.01	39.15
KRH69404	Soybean	nucleus	41.1	38.79
KRH69402	Soybean	nucleus	39.73	37.5
KRH74742	Soybean	nucleus	39.27	36.75

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100776076	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02009764	EMBL:BT097765
UniProt:C6TJC1	EnsemblPlantsGene:GLYMA_15G251800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
EMBL:KM818462	EnsemblPlants:KRH13619	ProteinID:KRH13619	ProteinID:KRH13619.1	PFAM:PF02798	PFAM:PF13410
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI0001B165D1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:48000297..48002309

Molecular Weight (calculated)

25610.7 Da

IEP (calculated)

4.928

GRAVY (calculated)

-0.398

Length

219 amino acids

Sequence
(BLAST)

001: MGDEVILLNF WLSPYGMRVR IALEEKGIKY ESREEDLSNK SSLLLQMNAV HKKIPVLIHN GKPVCESLII VEYIDEVWND QSPLLPSDPY QRNQARFWAN
101: YVDTKMYEIA LKFWRTEGEE KEAAKEEFSE CLELFEEQLG DKPYFGGDNL GLVDVVLVPL ICYFYVYNLY GNFINENKCP KIIAWAKRCT QKESVSKCFP
201: EVQRVKEFIS QKKKNLNSE

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.