CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98126	Soybean	cytosol	41.63	92.93
KRH13617	Soybean	cytosol, nucleus	62.9	63.47
KRH13616	Soybean	cytosol	60.63	62.04
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.42	61.85
KRH43848	Soybean	cytosol	60.63	61.19
KRH13625	Soybean	cytosol	58.37	58.9
KRH43843	Soybean	cytosol	57.01	57.53
KRH13620	Soybean	cytosol	57.47	57.47
KRH13622	Soybean	cytosol	43.89	56.73
KRH43845	Soybean	cytosol	55.66	55.41
KRH13619	Soybean	cytosol	52.94	53.42
KRH02498	Soybean	cytosol	52.49	53.21
KRH43846	Soybean	cytosol	48.42	52.45
KRH43842	Soybean	cytosol	36.2	51.95
KRH13618	Soybean	extracellular	50.68	50.91
KRH43847	Soybean	cytosol	47.51	50.72
KRH17272	Soybean	cytosol	47.06	47.06
KRH72918	Soybean	cytosol	46.61	46.61
KRH69403	Soybean	extracellular	22.17	36.57
KRH69402	Soybean	nucleus	36.65	34.91
KRH74742	Soybean	nucleus	36.65	34.62
KRH69404	Soybean	nucleus	36.2	34.48
KRH74740	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.65	34.47
KRG99195	Soybean	cytosol	21.72	33.8

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100527221	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02007052	EMBL:BT092047
UniProt:C6T3N6	EnsemblPlantsGene:GLYMA_11G198500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
EMBL:KM818456	EnsemblPlants:KRH30655	ProteinID:KRH30655	ProteinID:KRH30655.1	PFAM:PF02798	PFAM:PF13410
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000189D7E4	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:27589528..27591039

Molecular Weight (calculated)

25627.9 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.428

Length

221 amino acids

Sequence
(BLAST)

001: MAEANVVLLD FWPSSYGMRV KIALAEKGIS YECKQEDLEA RSSLLLEMNP VHKMIPVLIH NGKPICESLN IVQYIDETWN HKPSSLLPSD PYKRSQARFW
101: GDYIDKNVYN AVKRVWTGKG KEQEEFKKQF IQCLKTLEYE LGDKPYFGGE DFGYVDVALV PFTSWFYTVE TCGKLSIEKE CPKLMAWAKR CMEKESVATP
201: LPHPHQIYAF AMQYKQRHGL E

Best Arabidopsis Sequence Match ( AT1G78370.1 )
(BLAST)

001: MANLPILLDY WPSMFGMRAR VALREKGVEF EYREEDFSNK SPLLLQSNPI HKKIPVLVHN GKPVCESLNV VQYVDEAWPE KNPFFPSDPY GRAQARFWAD
101: FVDKKFTDAQ FKVWGKKGEE QEAGKKEFIE AVKILESELG DKPYFGGDSF GYVDISLITF SSWFQAYEKF GNFSIESESP KLIAWAKRCM EKESVSKSLP
201: DSEKIVAYAA EYRKNNL

Arabidopsis Description

GSTU20Glutathione S-transferase U20 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.