CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034977.1-P	Field mustard	cytosol	100.0	100.0
CDX87952	Canola	cytosol	96.92	96.92
AT3G43800.1	Thale cress	cytosol	88.55	88.55
CDX79258	Canola	cytosol	28.63	58.04
Solyc07g056490.2.1	Tomato	extracellular	53.3	55.25
CDY14615	Canola	cytosol	52.86	54.79
Solyc12g011310.1.1	Tomato	plastid	52.86	54.79
VIT_10s0003g04250.t01	Wine grape	cytosol	22.91	54.74
VIT_19s0093g00370.t01	Wine grape	cytosol	29.07	54.55
PGSC0003DMT400038054	Potato	endoplasmic reticulum	52.42	54.34
CDX79261	Canola	cytosol	52.42	54.34
CDX68016	Canola	cytosol	52.42	54.34
CDY26861	Canola	cytosol	51.98	53.88
KRH13622	Soybean	cytosol	40.53	53.8
CDY26266	Canola	cytosol	51.54	53.42
CDY21758	Canola	cytosol	51.54	53.42
CDX87452	Canola	cytosol	51.54	53.18
CDY48476	Canola	cytosol	51.1	52.97
CDX81808	Canola	cytosol	51.1	52.97
KRH43843	Soybean	cytosol	51.1	52.97
CDY21757	Canola	cytosol	50.66	52.51
KRH02498	Soybean	cytosol	50.22	52.29
CDX88440	Canola	cytosol	50.66	52.27
CDX81810	Canola	cytosol	50.22	52.05
CDX81809	Canola	cytosol	50.22	52.05
CDX68018	Canola	cytosol	49.78	51.83
PGSC0003DMT400071059	Potato	cytosol	50.22	51.82
CDY26267	Canola	cytosol	48.9	51.63
CDX83922	Canola	cytosol	49.78	51.6
CDX96787	Canola	cytosol	49.78	51.6
CDX79259	Canola	cytosol	49.78	51.6
CDX88441	Canola	cytosol	50.22	51.58
CDY48475	Canola	cytosol	38.33	51.48
CDX81807	Canola	cytosol	49.34	51.38
CDY21756	Canola	cytosol	49.34	51.14
CDX79260	Canola	cytosol	48.02	50.23
KRH13625	Soybean	cytosol	48.46	50.23
KRH13620	Soybean	cytosol	48.9	50.23
VIT_19s0093g00400.t01	Wine grape	cytosol	48.46	49.77
VIT_19s0093g00350.t01	Wine grape	cytosol	48.46	49.77
CDX68017	Canola	cytosol	47.58	49.77
KRH43845	Soybean	cytosol	48.46	49.55
CDX88438	Canola	cytosol	46.7	48.62
CDX88439	Canola	cytosol	46.7	48.62
VIT_19s0093g00320.t01	Wine grape	cytosol	47.14	48.42
CDY25831	Canola	cytosol	47.14	47.77
CDY25833	Canola	cytosol	47.14	47.77
CDY58045	Canola	cytosol	46.7	47.32
CDX68019	Canola	cytosol	45.81	47.27
CDY48477	Canola	cytosol	39.65	47.12
KRH43846	Soybean	cytosol	41.85	46.57
CDY45140	Canola	cytosol	25.55	45.67
CDY07793	Canola	cytosol	29.07	41.25
CDY37984	Canola	cytosol	37.0	37.0
CDY34896	Canola	cytosol	37.0	37.0
CDY37985	Canola	cytosol	36.56	36.56
CDX93432	Canola	cytosol	36.12	36.12
CDX77247	Canola	cytosol	34.36	34.82
CDY45138	Canola	cytosol	33.92	34.68
CDY30898	Canola	cytosol	34.8	33.76
CDY30896	Canola	cytosol	33.92	33.33
CDY56090	Canola	mitochondrion	30.4	33.17
CDY11636	Canola	mitochondrion	33.48	33.04
CDY40288	Canola	cytosol, plastid	32.6	32.6
CDY65968	Canola	cytosol	32.16	31.74
CDY16220	Canola	cytosol	31.72	31.72
CDY23533	Canola	cytosol	32.6	31.62
CDY48383	Canola	cytosol	32.6	31.62
CDY56091	Canola	cytosol	31.72	31.3
CDY11635	Canola	cytosol	32.16	31.2
CDY38775	Canola	cytosol	32.16	31.2
CDY14704	Canola	cytosol	31.28	31.14
CDY11637	Canola	mitochondrion	31.28	31.14
CDY38773	Canola	cytosol	31.28	31.14
CDY38774	Canola	cytosol	33.04	29.41
CDY28452	Canola	cytosol	25.11	29.08
CDY25824	Canola	cytosol	24.67	27.86
CDX68020	Canola	cytosol	3.96	25.0
CDY23534	Canola	cytosol, mitochondrion, plastid	19.82	24.59

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A078FH34	EnsemblPlants:CDY12324	ProteinID:CDY12324
ProteinID:CDY12324.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00061438001	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF493	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000253E5B4	SEG:seg	:	:

Description

BnaA06g20200DBnaA06g20200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH34]

Coordinates

chrLK032020:+:228061..229413

Molecular Weight (calculated)

26740.3 Da

IEP (calculated)

6.066

GRAVY (calculated)

-0.374

Length

227 amino acids

Sequence
(BLAST)

001: MSEEKVVVLN FWPSMFGARV IMALEEKEIK FEYKEEDVFG DKTDLLLQSN PVHKKIPVLI HNGKPVCESN IILEYIDEVW NNDKTLRLLP SDPYEKAKCR
101: FWADLIDKKV FDAGRRTWTK KGKEQEEAKR EFIETLKVLE TELEEKVYFG GNETVSMVDL VLISYYPWFH TWETIGGFSL EDHTPKLMDW VRRCLARPAI
201: SKSLPDRLKI LGRVSQIIKL HEFFYGY

Best Arabidopsis Sequence Match ( AT3G43800.1 )
(BLAST)

001: MSEEEVVVLN FWPSMFGARV IMALEEKEIK FEYKEEDVFG QKTDLLLQSN PVNKKIPVLI HNGKPVCESN IIVEYIDEVW KDDKTLRLLP SDPYQKSQCR
101: FWADLIDKKV FDAGRRTWTK RGKEQEEAKQ EFIEILKVLE RELGDKVYFG GNDNVSMVDL VLISYYPWFH TWETIGGFSV EDHTPKLMDW IRKCLTRPAI
201: SKSLPDPLKI FDRVTQIIKV HEFFYGY

Arabidopsis Description

GSTU27Glutathione S-transferase U27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZG7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.