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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97887
CDY51369

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17180.1 CDX97887 AT2G29420.1 21798944
AT1G17180.1 CDY51369 AT2G29420.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026679.1-P Field mustard cytosol 98.17 98.17
CDX81810 Canola cytosol 94.06 94.06
CDY21757 Canola cytosol 86.3 86.3
CDX81809 Canola cytosol 85.39 85.39
CDY21758 Canola cytosol 79.91 79.91
CDY48476 Canola cytosol 78.54 78.54
CDX81808 Canola cytosol 78.54 78.54
CDY26266 Canola cytosol 77.63 77.63
AT1G17180.1 Thale cress cytosol 76.71 76.02
CDX79258 Canola cytosol 36.07 70.54
CDY14615 Canola cytosol 69.86 69.86
CDY26861 Canola cytosol 69.41 69.41
CDX68016 Canola cytosol 68.04 68.04
CDX81807 Canola cytosol 67.58 67.89
CDX79261 Canola cytosol 67.58 67.58
CDY26267 Canola cytosol 65.75 66.98
CDY48475 Canola cytosol 50.23 65.09
CDX87452 Canola cytosol 63.01 62.73
CDX88440 Canola cytosol 62.56 62.27
CDX88441 Canola cytosol 62.56 61.99
CDX68018 Canola cytosol 61.64 61.93
CDX68019 Canola cytosol 62.1 61.82
CDX79259 Canola cytosol 60.73 60.73
CDX83922 Canola cytosol 60.27 60.27
CDX96787 Canola cytosol 60.27 60.27
Solyc12g011310.1.1 Tomato plastid 59.82 59.82
CDX79260 Canola cytosol 58.9 59.45
CDY25833 Canola cytosol 60.73 59.38
CDY58045 Canola cytosol 60.73 59.38
CDX68017 Canola cytosol 58.45 58.99
CDY25831 Canola cytosol 59.82 58.48
KRH13622 Soybean cytosol 45.21 57.89
CDX88438 Canola cytosol 57.53 57.8
CDX88439 Canola cytosol 57.53 57.8
Solyc07g056490.2.1 Tomato extracellular 56.62 56.62
KRH43843 Soybean cytosol 56.16 56.16
PGSC0003DMT400038054 Potato endoplasmic reticulum 56.16 56.16
VIT_19s0093g00350.t01 Wine grape cytosol 56.62 56.11
CDY48477 Canola cytosol 48.86 56.02
VIT_19s0093g00400.t01 Wine grape cytosol 56.16 55.66
PGSC0003DMT400071059 Potato cytosol 55.71 55.45
KRH02498 Soybean cytosol 54.79 55.05
VIT_10s0003g04250.t01 Wine grape cytosol 23.74 54.74
VIT_19s0093g00370.t01 Wine grape cytosol 30.14 54.55
KRH43845 Soybean cytosol 55.25 54.5
VIT_19s0093g00320.t01 Wine grape cytosol 54.79 54.3
KRH13625 Soybean cytosol 53.88 53.88
KRH13620 Soybean cytosol 54.34 53.85
KRH43846 Soybean cytosol 48.4 51.96
CDX87952 Canola cytosol 51.6 49.78
CDY12324 Canola cytosol 51.14 49.34
CDY45140 Canola cytosol 27.4 47.24
CDX68020 Canola cytosol 6.85 41.67
CDY30898 Canola cytosol 42.01 39.32
CDY45138 Canola cytosol 39.27 38.74
CDX77247 Canola cytosol 39.27 38.39
CDY07793 Canola cytosol 27.85 38.12
CDY30896 Canola cytosol 38.81 36.8
CDY34896 Canola cytosol 37.9 36.56
CDY37984 Canola cytosol 36.99 35.68
CDY56090 Canola mitochondrion 33.79 35.58
CDY37985 Canola cytosol 36.53 35.24
CDY23533 Canola cytosol 37.44 35.04
CDY48383 Canola cytosol 37.44 35.04
CDX93432 Canola cytosol 36.07 34.8
CDY65968 Canola cytosol 36.53 34.78
CDY11635 Canola cytosol 36.99 34.62
CDY38775 Canola cytosol 36.99 34.62
CDY56091 Canola cytosol 36.07 34.35
CDY16220 Canola cytosol 35.16 33.92
CDY11636 Canola mitochondrion 35.62 33.91
CDY38773 Canola cytosol 35.16 33.77
CDY14704 Canola cytosol 35.16 33.77
CDY11637 Canola mitochondrion 35.16 33.77
CDY40288 Canola cytosol, plastid 34.7 33.48
CDY38774 Canola cytosol 35.16 30.2
CDY28452 Canola cytosol 26.94 30.1
CDY25824 Canola cytosol 26.48 28.86
CDY23534 Canola cytosol, mitochondrion, plastid 19.18 22.95
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10UniProt:A0A078G8P4EnsemblPlants:CDY21756ProteinID:CDY21756
ProteinID:CDY21756.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00016264001InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410
PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EDD960::::
Description
BnaA09g45070DBnaA09g45070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8P4]
Coordinates
chrLK032123:-:586691..587520
Molecular Weight (calculated)
25201.5 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.321
Length
219 amino acids
Sequence
(BLAST)
001: MVDEVILLDY WPSLFGVRTR IALEEKNIKF DYIEQDLCNK SALLLEMNPV HKKIPVLIHN GKPVCESLIQ VEFIDETWPK ANPLLPSDPY QRAQARFWGN
101: FIDKMLPGLG KLMWGANGQE QEEGKKEFVE MLKTVESELG DRTYFGGETF GYVDIALIGF YGWFDAFEKY GNFSIEAECP KIIAWAKRCV KRDSVAKSLP
201: DSEKVTELVP ELKKKKRVE
Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)
001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE
Arabidopsis Description
GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.