Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17190.1 | CDY07793 | AT1G10360.1 | 21798944 |
| AT1G17190.1 | CDY34896 | AT1G10360.1 | 21798944 |
| AT1G17190.1 | CDY45446 | AT2G29490.1 | 21798944 |
| AT1G17190.1 | CDY53373 | AT2G29490.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016615.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX96787 | Canola | cytosol | 100.0 | 100.0 |
| AT1G17190.1 | Thale cress | cytosol | 88.13 | 87.73 |
| CDY48477 | Canola | cytosol | 75.8 | 86.91 |
| CDX79258 | Canola | cytosol | 36.53 | 71.43 |
| CDY48476 | Canola | cytosol | 65.3 | 65.3 |
| CDY26266 | Canola | cytosol | 64.84 | 64.84 |
| CDY21758 | Canola | cytosol | 64.38 | 64.38 |
| CDX81808 | Canola | cytosol | 63.93 | 63.93 |
| CDY26861 | Canola | cytosol | 63.93 | 63.93 |
| CDY14615 | Canola | cytosol | 63.93 | 63.93 |
| CDX68016 | Canola | cytosol | 63.93 | 63.93 |
| CDX79261 | Canola | cytosol | 63.47 | 63.47 |
| CDY48475 | Canola | cytosol | 48.86 | 63.31 |
| CDY26267 | Canola | cytosol | 61.19 | 62.33 |
| CDX87452 | Canola | cytosol | 62.1 | 61.82 |
| CDX68019 | Canola | cytosol | 61.64 | 61.36 |
| CDX68017 | Canola | cytosol | 60.73 | 61.29 |
| Solyc07g056490.2.1 | Tomato | extracellular | 61.19 | 61.19 |
| CDY21757 | Canola | cytosol | 61.19 | 61.19 |
| CDX81810 | Canola | cytosol | 61.19 | 61.19 |
| CDX79260 | Canola | cytosol | 60.27 | 60.83 |
| PGSC0003DMT400038054 | Potato | endoplasmic reticulum | 60.73 | 60.73 |
| CDX81809 | Canola | cytosol | 60.73 | 60.73 |
| CDX68018 | Canola | cytosol | 60.27 | 60.55 |
| CDX88440 | Canola | cytosol | 60.73 | 60.45 |
| CDX79259 | Canola | cytosol | 60.27 | 60.27 |
| CDY21756 | Canola | cytosol | 60.27 | 60.27 |
| CDX81807 | Canola | cytosol | 59.82 | 60.09 |
| CDX88439 | Canola | cytosol | 59.36 | 59.63 |
| CDX88438 | Canola | cytosol | 59.36 | 59.63 |
| CDX88441 | Canola | cytosol | 59.36 | 58.82 |
| KRH43843 | Soybean | cytosol | 57.99 | 57.99 |
| Solyc12g011310.1.1 | Tomato | plastid | 57.53 | 57.53 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 57.08 | 56.56 |
| KRH13622 | Soybean | cytosol | 43.84 | 56.14 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 56.16 | 55.66 |
| PGSC0003DMT400071059 | Potato | cytosol | 55.71 | 55.45 |
| KRH13620 | Soybean | cytosol | 55.71 | 55.2 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 23.74 | 54.74 |
| KRH13625 | Soybean | cytosol | 54.34 | 54.34 |
| KRH43845 | Soybean | cytosol | 54.79 | 54.05 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 29.68 | 53.72 |
| KRH02498 | Soybean | cytosol | 52.97 | 53.21 |
| CDY25833 | Canola | cytosol | 53.88 | 52.68 |
| CDY58045 | Canola | cytosol | 53.42 | 52.23 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 52.51 | 52.04 |
| CDY25831 | Canola | cytosol | 52.97 | 51.79 |
| KRH43846 | Soybean | cytosol | 47.03 | 50.49 |
| CDX87952 | Canola | cytosol | 51.6 | 49.78 |
| CDY12324 | Canola | cytosol | 51.6 | 49.78 |
| CDY45140 | Canola | cytosol | 26.48 | 45.67 |
| CDY07793 | Canola | cytosol | 30.59 | 41.88 |
| CDY34896 | Canola | cytosol | 39.27 | 37.89 |
| CDY37984 | Canola | cytosol | 38.36 | 37.0 |
| CDY37985 | Canola | cytosol | 37.9 | 36.56 |
| CDY40288 | Canola | cytosol, plastid | 37.9 | 36.56 |
| CDY14704 | Canola | cytosol | 37.9 | 36.4 |
| CDX93432 | Canola | cytosol | 37.44 | 36.12 |
| CDY16220 | Canola | cytosol | 37.44 | 36.12 |
| CDX68020 | Canola | cytosol | 5.94 | 36.11 |
| CDY45138 | Canola | cytosol | 36.53 | 36.04 |
| CDY11637 | Canola | mitochondrion | 37.44 | 35.96 |
| CDY38773 | Canola | cytosol | 37.44 | 35.96 |
| CDY30898 | Canola | cytosol | 38.36 | 35.9 |
| CDX77247 | Canola | cytosol | 36.53 | 35.71 |
| CDY56090 | Canola | mitochondrion | 33.79 | 35.58 |
| CDY65968 | Canola | cytosol | 36.99 | 35.22 |
| CDY11636 | Canola | mitochondrion | 36.99 | 35.22 |
| CDY56091 | Canola | cytosol | 36.99 | 35.22 |
| CDY48383 | Canola | cytosol | 37.44 | 35.04 |
| CDY23533 | Canola | cytosol | 37.44 | 35.04 |
| CDY11635 | Canola | cytosol | 36.99 | 34.62 |
| CDY38775 | Canola | cytosol | 36.99 | 34.62 |
| CDY30896 | Canola | cytosol | 36.07 | 34.2 |
| CDY28452 | Canola | cytosol | 30.59 | 34.18 |
| CDY25824 | Canola | cytosol | 30.59 | 33.33 |
| CDY38774 | Canola | cytosol | 36.53 | 31.37 |
| CDY23534 | Canola | cytosol, mitochondrion, plastid | 21.92 | 26.23 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EnsemblPlants:CDX83922 | ProteinID:CDX83922 | ProteinID:CDX83922.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00139700001 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf |
| InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF02798 | PFAM:PF13410 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI00025456C9 | : | : | : | : | : |
Description
BnaC08g17230D
Coordinates
chrLK031834:-:1258578..1259774
Molecular Weight (calculated)
25669.9 Da
IEP (calculated)
4.832
GRAVY (calculated)
-0.337
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEVILLDY WPSMFGMRTK MALAEKGVSY EYIETDPWIK TPLLIEMNPI HKKIPVLIHK GKPICESLIQ LEYIDEVWSG TYPMLPSDPY QKAQARFWAD
101: FIDKKFYDPS WKVWGTNGEE QVAAKKELLE HFKTLETELG DKTYYGGEVF GFLDIALMGY YSWFKAMEKF GEFSIETEFP KLTEWTKRCL ERESVVKALT
201: DSDKILEYAY VLRKKFGAE
101: FIDKKFYDPS WKVWGTNGEE QVAAKKELLE HFKTLETELG DKTYYGGEVF GFLDIALMGY YSWFKAMEKF GEFSIETEFP KLTEWTKRCL ERESVVKALT
201: DSDKILEYAY VLRKKFGAE
001: MANDQVILLD YWPSMFGMRT KMALAEKGVK YEYKETDPWV KTPLLIEMNP IHKKIPVLIH NGKPICESLI QLEYIDEVWS DASPILPSDP YQKSRARFWA
101: EFIDKKFYDP SWKVWATMGE EHAAVKKELL EHFKTLETEL GDKPYYGGEV FGYLDIALMG YYSWFKAMEK FGEFSIETEF PILTTWTKRC LERESVVKAL
201: ADSDRIIEYV YVLRKKFGAA
101: EFIDKKFYDP SWKVWATMGE EHAAVKKELL EHFKTLETEL GDKPYYGGEV FGYLDIALMG YYSWFKAMEK FGEFSIETEF PILTTWTKRC LERESVVKAL
201: ADSDRIIEYV YVLRKKFGAA
Arabidopsis Description
GSTU26Glutathione S-transferase U26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.