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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 2
  • mitochondrion 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68017 Canola cytosol 99.54 99.54
AT1G78370.1 Thale cress cytosol 89.4 89.4
CDX68016 Canola cytosol 70.05 69.41
CDX79261 Canola cytosol 70.05 69.41
CDY26861 Canola cytosol 69.59 68.95
CDY14615 Canola cytosol 69.59 68.95
CDY21758 Canola cytosol 66.82 66.21
CDX68018 Canola cytosol 65.9 65.6
CDY26266 Canola cytosol 65.9 65.3
CDX81808 Canola cytosol 65.9 65.3
CDX79258 Canola cytosol 33.64 65.18
CDX79259 Canola cytosol 65.44 64.84
CDY48476 Canola cytosol 65.44 64.84
CDX88439 Canola cytosol 64.52 64.22
CDX88438 Canola cytosol 64.52 64.22
Solyc07g056490.2.1 Tomato extracellular 62.67 62.1
CDY26267 Canola cytosol 61.29 61.86
PGSC0003DMT400038054 Potato endoplasmic reticulum 62.21 61.64
CDX81810 Canola cytosol 62.21 61.64
CDY48475 Canola cytosol 47.93 61.54
CDX88440 Canola cytosol 62.21 61.36
CDX87452 Canola cytosol 62.21 61.36
CDY21757 Canola cytosol 61.75 61.19
KRH43843 Soybean cytosol 61.29 60.73
CDX96787 Canola cytosol 60.83 60.27
CDX83922 Canola cytosol 60.83 60.27
CDX81807 Canola cytosol 59.91 59.63
Solyc12g011310.1.1 Tomato plastid 59.91 59.36
CDX68019 Canola cytosol 59.91 59.09
CDY21756 Canola cytosol 59.45 58.9
CDX81809 Canola cytosol 59.45 58.9
CDX88441 Canola cytosol 59.91 58.82
PGSC0003DMT400071059 Potato cytosol 58.99 58.18
CDY58045 Canola cytosol 59.91 58.04
KRH13625 Soybean cytosol 58.53 57.99
CDY25833 Canola cytosol 59.45 57.59
KRH13622 Soybean cytosol 45.16 57.31
CDY25831 Canola cytosol 58.99 57.14
CDY48477 Canola cytosol 50.23 57.07
VIT_19s0093g00350.t01 Wine grape cytosol 58.06 57.01
KRH02498 Soybean cytosol 57.14 56.88
KRH43845 Soybean cytosol 58.06 56.76
VIT_19s0093g00400.t01 Wine grape cytosol 57.6 56.56
KRH13620 Soybean cytosol 54.84 53.85
VIT_19s0093g00370.t01 Wine grape cytosol 29.03 52.07
VIT_19s0093g00320.t01 Wine grape cytosol 52.53 51.58
VIT_10s0003g04250.t01 Wine grape cytosol 22.58 51.58
KRH43846 Soybean cytosol 46.54 49.51
CDX87952 Canola cytosol 50.23 48.02
CDY12324 Canola cytosol 50.23 48.02
CDY45140 Canola cytosol 27.65 47.24
CDY07793 Canola cytosol 31.8 43.12
CDY56090 Canola mitochondrion 40.09 41.83
CDX68020 Canola cytosol 6.91 41.67
CDY14704 Canola cytosol 43.78 41.67
CDY16220 Canola cytosol 43.32 41.41
CDY40288 Canola cytosol, plastid 42.4 40.53
CDY34896 Canola cytosol 42.4 40.53
CDY45138 Canola cytosol 40.55 39.64
CDY11636 Canola mitochondrion 41.94 39.57
CDX77247 Canola cytosol 40.55 39.29
CDX93432 Canola cytosol 40.09 38.33
CDY11637 Canola mitochondrion 40.09 38.16
CDY38773 Canola cytosol 40.09 38.16
CDY30898 Canola cytosol 41.01 38.03
CDY37985 Canola cytosol 39.63 37.89
CDY37984 Canola cytosol 39.63 37.89
CDY30896 Canola cytosol 40.09 37.66
CDY28452 Canola cytosol 33.18 36.73
CDY38774 Canola cytosol 41.94 35.69
CDY25824 Canola cytosol 32.72 35.32
CDY65968 Canola cytosol 37.33 35.22
CDY56091 Canola cytosol 36.41 34.35
CDY11635 Canola cytosol 36.87 34.19
CDY38775 Canola cytosol 36.87 34.19
CDY23533 Canola cytosol 36.41 33.76
CDY48383 Canola cytosol 36.41 33.76
CDY23534 Canola cytosol, mitochondrion, plastid 22.58 26.78
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10MapMan:9.5.1.5.3unigene:Bna.2451EnsemblPlants:CDX79260
ProteinID:CDX79260ProteinID:CDX79260.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00131894001InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045
InterPro:IPR010987PFAM:PF02798PFAM:PF13410PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260
PANTHER:PTHR11260:SF479GO:Q2EGT6UniProt:Q2EGT6SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI00006AB5C0:::::
Description
BnaC06g20430DBnaC06g20430D protein [Source:UniProtKB/TrEMBL;Acc:Q2EGT6]
Coordinates
chrLK031817:-:831964..833183
Molecular Weight (calculated)
24732.5 Da
IEP (calculated)
5.905
GRAVY (calculated)
-0.322
Length
217 amino acids
Sequence
(BLAST)
001: MANSTILLDY WPSMFCMRAR VALREKGVVF EAREEDLTNK SPLLLQSNPI HKKVPVLIHN GKPVCESLNV VQYVDEAWSD KNPFFPSDPY GKAQARFWAD
101: FVDKKFSDAQ FKIWGKKGEE QAAGVKEFIE AVKILEAELG DKPYFGGDSF GYVDIALITF YSWFGAYEKF GNFSIEAESP KLIAWAKRCM EKESVSKSLP
201: DQEKIVAYAA EFRKNNL
Best Arabidopsis Sequence Match ( AT1G78370.1 )
(BLAST)
001: MANLPILLDY WPSMFGMRAR VALREKGVEF EYREEDFSNK SPLLLQSNPI HKKIPVLVHN GKPVCESLNV VQYVDEAWPE KNPFFPSDPY GRAQARFWAD
101: FVDKKFTDAQ FKVWGKKGEE QEAGKKEFIE AVKILESELG DKPYFGGDSF GYVDISLITF SSWFQAYEKF GNFSIESESP KLIAWAKRCM EKESVSKSLP
201: DSEKIVAYAA EYRKNNL
Arabidopsis Description
GSTU20Glutathione S-transferase U20 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7C9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.