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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97887
CDY51369

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17180.1 CDX97887 AT2G29420.1 21798944
AT1G17180.1 CDY51369 AT2G29420.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026681.1-P Field mustard cytosol 97.72 97.72
CDY21758 Canola cytosol 97.72 97.72
Bra026684.1-P Field mustard cytosol 97.72 97.72
CDY48476 Canola cytosol 86.76 86.76
CDY26266 Canola cytosol 85.84 85.84
CDY21757 Canola cytosol 83.56 83.56
AT1G17180.1 Thale cress cytosol 83.56 82.81
CDX81809 Canola cytosol 81.28 81.28
CDX81810 Canola cytosol 80.82 80.82
CDY21756 Canola cytosol 78.54 78.54
CDY26267 Canola cytosol 72.6 73.95
CDY48475 Canola cytosol 56.62 73.37
CDX79258 Canola cytosol 37.44 73.21
CDY26861 Canola cytosol 73.06 73.06
CDY14615 Canola cytosol 72.15 72.15
CDX68016 Canola cytosol 71.23 71.23
CDX79261 Canola cytosol 70.78 70.78
CDX81807 Canola cytosol 69.86 70.18
CDX68019 Canola cytosol 66.67 66.36
CDX79260 Canola cytosol 65.3 65.9
CDX88438 Canola cytosol 65.3 65.6
CDX88439 Canola cytosol 65.3 65.6
CDX68017 Canola cytosol 64.84 65.44
CDX88441 Canola cytosol 65.75 65.16
CDX68018 Canola cytosol 64.84 65.14
CDX87452 Canola cytosol 64.84 64.55
CDX88440 Canola cytosol 64.38 64.09
CDX96787 Canola cytosol 63.93 63.93
CDX83922 Canola cytosol 63.93 63.93
CDX79259 Canola cytosol 63.93 63.93
Solyc07g056490.2.1 Tomato extracellular 61.64 61.64
Solyc12g011310.1.1 Tomato plastid 60.73 60.73
PGSC0003DMT400038054 Potato endoplasmic reticulum 59.82 59.82
KRH43843 Soybean cytosol 59.82 59.82
CDY58045 Canola cytosol 60.73 59.38
VIT_19s0093g00400.t01 Wine grape cytosol 59.82 59.28
CDY48477 Canola cytosol 51.6 59.16
PGSC0003DMT400071059 Potato cytosol 59.36 59.09
KRH13622 Soybean cytosol 46.12 59.06
CDY25833 Canola cytosol 60.27 58.93
VIT_19s0093g00350.t01 Wine grape cytosol 59.36 58.82
CDY25831 Canola cytosol 59.82 58.48
VIT_19s0093g00320.t01 Wine grape cytosol 58.9 58.37
VIT_19s0093g00370.t01 Wine grape cytosol 31.51 57.02
KRH02498 Soybean cytosol 56.62 56.88
KRH43845 Soybean cytosol 57.53 56.76
KRH13620 Soybean cytosol 55.71 55.2
VIT_10s0003g04250.t01 Wine grape cytosol 23.74 54.74
KRH13625 Soybean cytosol 54.34 54.34
KRH43846 Soybean cytosol 49.77 53.43
CDY12324 Canola cytosol 52.97 51.1
CDX87952 Canola cytosol 52.97 51.1
CDY45140 Canola cytosol 27.4 47.24
CDY07793 Canola cytosol 29.22 40.0
CDX68020 Canola cytosol 6.39 38.89
CDY45138 Canola cytosol 39.27 38.74
CDX77247 Canola cytosol 39.27 38.39
CDY37984 Canola cytosol 39.73 38.33
CDY30898 Canola cytosol 40.64 38.03
CDY37985 Canola cytosol 39.27 37.89
CDY34896 Canola cytosol 39.27 37.89
CDX93432 Canola cytosol 38.81 37.44
CDY56090 Canola mitochondrion 35.16 37.02
CDY30896 Canola cytosol 38.81 36.8
CDY16220 Canola cytosol 37.44 36.12
CDY14704 Canola cytosol 37.44 35.96
CDY40288 Canola cytosol, plastid 36.99 35.68
CDY11636 Canola mitochondrion 37.44 35.65
CDY65968 Canola cytosol 36.99 35.22
CDY11637 Canola mitochondrion 36.53 35.09
CDY38773 Canola cytosol 36.53 35.09
CDY23533 Canola cytosol 37.44 35.04
CDY48383 Canola cytosol 37.44 35.04
CDY56091 Canola cytosol 36.53 34.78
CDY11635 Canola cytosol 36.99 34.62
CDY38775 Canola cytosol 36.99 34.62
CDY28452 Canola cytosol 29.68 33.16
CDY25824 Canola cytosol 29.22 31.84
CDY38774 Canola cytosol 36.99 31.76
CDY23534 Canola cytosol, mitochondrion, plastid 21.0 25.14
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EnsemblPlants:CDX81808ProteinID:CDX81808ProteinID:CDX81808.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00136751001InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF02798PFAM:PF13410PFscan:PS50404
PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF479SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0004EBF2CA:::::
Description
BnaC08g37930D
Coordinates
chrLK031826:+:895997..896860
Molecular Weight (calculated)
25293.6 Da
IEP (calculated)
5.224
GRAVY (calculated)
-0.345
Length
219 amino acids
Sequence
(BLAST)
001: MADEVILLDY WPSMFGMRTR VALEEKNIKF DYREQDLFNK SPFLLEMNPV HKKIPVLIHN GKPVCESLIQ VEYIDETWPG GNSFLPSDPY QRAQAKFWGD
101: FIDKKVYGPT RLIWGAKGEE QEAGTKEFIE MLKMLESELG DKTYFGGETF GYVDIAMIGF YCWFDVLEKC GNFSIEAECP KLIAWAKRCM KRESVGKSLP
201: NSDKITKFVP ELKKKIGIE
Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)
001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E
Arabidopsis Description
GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.