Factsheet for Bra026684.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra039980.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17180.1	Bra039980.1-P	AT2G29420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21758	Canola	cytosol	100.0	100.0
Bra026681.1-P	Field mustard	cytosol	99.09	99.09
CDX81808	Canola	cytosol	97.72	97.72
Bra025994.1-P	Field mustard	cytosol	86.3	86.3
AT1G17180.1	Thale cress	cytosol	85.39	84.62
Bra026680.1-P	Field mustard	cytosol	84.47	84.47
Bra026679.1-P	Field mustard	cytosol	79.91	79.91
Bra025995.1-P	Field mustard	cytosol	74.89	76.28
Bra003644.1-P	Field mustard	cytosol	73.06	73.06
Bra008357.1-P	Field mustard	cytosol	36.07	69.3
Bra003647.1-P	Field mustard	cytosol	67.58	67.27
Bra035031.1-P	Field mustard	cytosol	66.21	65.91
Bra003645.1-P	Field mustard	cytosol	61.19	65.69
Bra003646.1-P	Field mustard	cytosol	65.3	65.6
Bra035029.1-P	Field mustard	cytosol	64.38	64.68
Bra016615.1-P	Field mustard	cytosol	64.38	64.38
Solyc07g056490.2.1	Tomato	extracellular	62.1	62.1
Solyc12g011310.1.1	Tomato	plastid	61.64	61.64
KRH43843	Soybean	cytosol	60.73	60.73
PGSC0003DMT400038054	Potato	endoplasmic reticulum	60.27	60.27
KRH13622	Soybean	cytosol	47.03	60.23
Bra025993.1-P	Field mustard	cytosol	60.27	60.0
VIT_19s0093g00400.t01	Wine grape	cytosol	60.27	59.73
PGSC0003DMT400071059	Potato	cytosol	59.82	59.55
VIT_19s0093g00350.t01	Wine grape	cytosol	59.82	59.28
Bra038140.1-P	Field mustard	cytosol	60.27	58.93
VIT_19s0093g00320.t01	Wine grape	cytosol	58.9	58.37
VIT_19s0093g00370.t01	Wine grape	cytosol	31.96	57.85
KRH02498	Soybean	cytosol	57.53	57.8
KRH43845	Soybean	cytosol	58.45	57.66
KRH13620	Soybean	cytosol	56.62	56.11
VIT_10s0003g04250.t01	Wine grape	cytosol	24.2	55.79
KRH13625	Soybean	cytosol	55.25	55.25
KRH43846	Soybean	cytosol	50.68	54.41
Bra003648.1-P	Field mustard	cytosol	35.16	51.68
Bra034977.1-P	Field mustard	cytosol	53.42	51.54
Bra027840.1-P	Field mustard	cytosol	41.1	38.46
Bra019940.1-P	Field mustard	cytosol	39.73	38.33
Bra031708.1-P	Field mustard	cytosol	39.27	37.89
Bra007889.1-P	Field mustard	mitochondrion	35.62	37.5
Bra024659.1-P	Field mustard	cytosol	37.44	36.12
Bra007890.1-P	Field mustard	cytosol	37.9	36.09
Bra003970.1-P	Field mustard	cytosol	38.36	35.9
Bra016253.1-P	Field mustard	cytosol	36.99	35.53
Bra016250.1-P	Field mustard	cytosol	37.9	35.47
Bra016252.1-P	Field mustard	cytosol	36.99	35.22
Bra012422.1-P	Field mustard	cytosol	29.68	32.83
Bra027842.1-P	Field mustard	cytosol	20.09	28.57

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra026684	EnsemblPlants:Bra026684.1	EnsemblPlants:Bra026684.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4ED24	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002542BC3	:	:	:	:	:

Description

AT1G17180 (E=1e-111) ATGSTU25 | ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25); glutathione transferase

Coordinates

chrA09:-:33203749..33204491

Molecular Weight (calculated)

25283.7 Da

IEP (calculated)

5.224

GRAVY (calculated)

-0.331

Length

219 amino acids

Sequence
(BLAST)

001: MADEVILLDY WPSMFGMRTR VALEEKNIKF DYREQDLFNK SPILLEMNPV HKKIPVLIHN GKPVCESLIQ VEYIDETWPG GNPFLPSDPY QRAQAKFWGD
101: FIDKKVYGPT RLIWGAKGEE QEAGTKEFIE MLKMLESELG DKTYFGGETF GYVDIAMIGF YCWFDVLEKC GNFSIEAECP KLIAWAKRCM KRESVAKSLP
201: DSNKITKFVP ELKKKIGIE

Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)

001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E

Arabidopsis Description

GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.