Factsheet for Bra003646.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018385.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78340.1	Bra018385.1-P	AT2G29490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68018	Canola	cytosol	98.62	98.62
AT1G78340.1	Thale cress	cytosol	89.91	89.91
Bra035029.1-P	Field mustard	cytosol	83.49	83.49
Bra003648.1-P	Field mustard	cytosol	55.96	81.88
Bra003644.1-P	Field mustard	cytosol	74.31	73.97
Bra026684.1-P	Field mustard	cytosol	65.6	65.3
Bra026681.1-P	Field mustard	cytosol	65.14	64.84
Bra003645.1-P	Field mustard	cytosol	60.55	64.71
Bra035031.1-P	Field mustard	cytosol	65.14	64.55
Bra026680.1-P	Field mustard	cytosol	64.22	63.93
Bra025994.1-P	Field mustard	cytosol	63.76	63.47
VIT_19s0093g00370.t01	Wine grape	cytosol	34.86	62.81
Bra025995.1-P	Field mustard	cytosol	61.47	62.33
Solyc07g056490.2.1	Tomato	extracellular	62.39	62.1
Bra026679.1-P	Field mustard	cytosol	62.39	62.1
PGSC0003DMT400038054	Potato	endoplasmic reticulum	61.47	61.19
KRH43843	Soybean	cytosol	61.01	60.73
Bra025993.1-P	Field mustard	cytosol	61.01	60.45
Bra016615.1-P	Field mustard	cytosol	60.55	60.27
VIT_10s0003g04250.t01	Wine grape	cytosol	26.15	60.0
Solyc12g011310.1.1	Tomato	plastid	59.17	58.9
PGSC0003DMT400071059	Potato	cytosol	59.17	58.64
KRH02498	Soybean	cytosol	58.26	58.26
Bra003647.1-P	Field mustard	cytosol	58.72	58.18
KRH13625	Soybean	cytosol	57.8	57.53
KRH13622	Soybean	cytosol	44.95	57.31
Bra038140.1-P	Field mustard	cytosol	57.8	56.25
Bra008357.1-P	Field mustard	cytosol	29.36	56.14
KRH43845	Soybean	cytosol	56.42	55.41
VIT_19s0093g00350.t01	Wine grape	cytosol	55.96	55.2
VIT_19s0093g00400.t01	Wine grape	cytosol	55.5	54.75
VIT_19s0093g00320.t01	Wine grape	cytosol	53.67	52.94
KRH13620	Soybean	cytosol	50.92	50.23
Bra034977.1-P	Field mustard	cytosol	51.83	49.78
KRH43846	Soybean	cytosol	44.5	47.55
Bra027840.1-P	Field mustard	cytosol	44.04	41.03
Bra007889.1-P	Field mustard	mitochondrion	38.53	40.38
Bra019940.1-P	Field mustard	cytosol	41.74	40.09
Bra031708.1-P	Field mustard	cytosol	41.28	39.65
Bra024659.1-P	Field mustard	cytosol	40.37	38.77
Bra016252.1-P	Field mustard	cytosol	40.83	38.7
Bra007890.1-P	Field mustard	cytosol	40.37	38.26
Bra016253.1-P	Field mustard	cytosol	39.91	38.16
Bra016250.1-P	Field mustard	cytosol	40.83	38.03
Bra003970.1-P	Field mustard	cytosol	39.91	37.18
Bra012422.1-P	Field mustard	cytosol	33.49	36.87
Bra027842.1-P	Field mustard	cytosol	22.94	32.47

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra003646	EnsemblPlants:Bra003646.1	EnsemblPlants:Bra003646.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4CHG3	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002541458	:	:	:	:	:

Description

AT1G78340 (E=1e-115) ATGSTU22 | ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22); glutathione transferase

Coordinates

chrA07:+:14221761..14222695

Molecular Weight (calculated)

25243.4 Da

IEP (calculated)

5.046

GRAVY (calculated)

-0.354

Length

218 amino acids

Sequence
(BLAST)

001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLREK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPLLPSDPY QRAQARFWVD
101: FIDTKVYEPA DKIWSTKGEV QEKAKKEYIE ALKILESELG NKPYFGGDNF GFVDIAMTGY YMWFEASEKC GNFSIEPECP TLMASAKRCL QRDSVVNSVP
201: DPEKIVEFAF KIRKIYCV

Best Arabidopsis Sequence Match ( AT1G78340.1 )
(BLAST)

001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLRDK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPILPSDPY QRAQARFWVD
101: FVDTKLFEPA DKIWQTKGEE QETAKKEYIE ALKILETELG DKPYFGGDTF GFVDIAMTGY YSWFEASEKL ANFSIEPECP TLMASAKRCL QRESVVQSLH
201: DSEKILAFAY KIRKIYCV

Arabidopsis Description

GSTU22Glutathione S-transferase U22 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.