Factsheet for Bra003647.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68019	Canola	cytosol	99.55	99.55
AT1G78320.1	Thale cress	cytosol	86.36	86.36
VIT_19s0015g02560.t01	Wine grape	cytosol	39.09	78.18
VIT_19s0015g02830.t01	Wine grape	cytosol	39.09	71.67
VIT_00s0240g00020.t01	Wine grape	cytosol	38.18	71.19
Bra025994.1-P	Field mustard	cytosol	67.73	68.04
Bra026684.1-P	Field mustard	cytosol	67.27	67.58
Bra026681.1-P	Field mustard	cytosol	67.27	67.58
Bra025995.1-P	Field mustard	cytosol	64.55	66.05
Bra003644.1-P	Field mustard	cytosol	65.45	65.75
VIT_19s0015g02880.t01	Wine grape	cytosol	60.91	64.42
Bra026680.1-P	Field mustard	cytosol	63.64	63.93
VIT_19s0093g00310.t01	Wine grape	cytosol	62.73	63.01
VIT_19s0093g00260.t01	Wine grape	cytosol	62.73	63.01
VIT_19s0015g02590.t01	Wine grape	cytosol	59.55	62.68
VIT_19s0015g02680.t01	Wine grape	cytosol	62.27	62.56
VIT_19s0015g02700.t01	Wine grape	cytosol	62.27	62.56
VIT_19s0093g00110.t01	Wine grape	cytosol	62.27	62.56
VIT_19s0093g00150.t01	Wine grape	cytosol	61.82	62.1
VIT_00s0240g00050.t01	Wine grape	cytosol	61.82	62.1
Bra035031.1-P	Field mustard	cytosol	61.82	61.82
Bra026679.1-P	Field mustard	cytosol	61.36	61.64
Bra016615.1-P	Field mustard	cytosol	61.36	61.64
VIT_19s0015g02890.t01	Wine grape	cytosol	61.36	61.64
Bra035029.1-P	Field mustard	cytosol	60.91	61.47
VIT_19s0093g00190.t01	Wine grape	cytosol	60.91	61.19
VIT_19s0015g02730.t01	Wine grape	cytosol	60.91	61.19
Bra003645.1-P	Field mustard	cytosol	55.45	59.8
Bra025993.1-P	Field mustard	cytosol	59.09	59.09
Bra003646.1-P	Field mustard	cytosol	58.18	58.72
VIT_19s0027g00460.t01	Wine grape	cytosol	59.09	58.3
VIT_19s0093g00220.t01	Wine grape	cytosol	59.55	57.71
Solyc12g011300.1.1	Tomato	cytosol	57.27	57.27
Solyc10g007640.2.1	Tomato	cytosol	57.27	57.01
PGSC0003DMT400054729	Potato	cytosol	57.27	57.01
VIT_19s0015g02690.t01	Wine grape	cytosol	41.82	56.44
PGSC0003DMT400020286	Potato	cytosol	50.91	54.9
Bra008357.1-P	Field mustard	cytosol	27.73	53.51
VIT_19s0093g00160.t01	Wine grape	cytosol	50.45	53.11
PGSC0003DMT400092412	Potato	cytosol	52.27	52.51
Solyc10g007620.1.1	Tomato	cytosol	51.82	52.05
Bra038140.1-P	Field mustard	cytosol	52.27	51.34
Bra034977.1-P	Field mustard	cytosol	47.27	45.81
Bra003648.1-P	Field mustard	cytosol	30.0	44.3
VIT_19s0015g02610.t01	Wine grape	cytosol	60.45	40.67
Bra007889.1-P	Field mustard	mitochondrion	37.27	39.42
Bra031708.1-P	Field mustard	cytosol	40.45	39.21
Bra024659.1-P	Field mustard	cytosol	40.0	38.77
Bra019940.1-P	Field mustard	cytosol	40.0	38.77
Bra016252.1-P	Field mustard	cytosol	40.45	38.7
Bra027840.1-P	Field mustard	cytosol	40.45	38.03
Bra007890.1-P	Field mustard	cytosol	38.18	36.52
Bra016253.1-P	Field mustard	cytosol	37.73	36.4
Bra003970.1-P	Field mustard	cytosol	38.18	35.9
Bra016250.1-P	Field mustard	cytosol	38.18	35.9
Bra012422.1-P	Field mustard	cytosol	30.91	34.34
Bra027842.1-P	Field mustard	cytosol	21.82	31.17

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra003647	EnsemblPlants:Bra003647.1	EnsemblPlants:Bra003647.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4CHG4	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF493	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002541459	:	:	:	:	:

Description

AT1G78320 (E=2e-109) ATGSTU23 | ATGSTU23 (GLUTATHIONE S-TRANSFERASE TAU 23); glutathione transferase

Coordinates

chrA07:+:14223559..14224900

Molecular Weight (calculated)

25359.7 Da

IEP (calculated)

6.787

GRAVY (calculated)

-0.276

Length

220 amino acids

Sequence
(BLAST)

001: MAEEVILLDY WSSMFGMRTR IALEEKGVKY RYREEDLSNK SPLLLEMNPI HKKIPVLIHK GKPICESIIQ VQYIDEVWPD TNPILPSDPY HRAQARFWSD
101: YIDKKTAGPC KALQRETGEK QEAAKMEFME VLKNLDSELG DKSFFGGNVF GLVDIAFIGF YSWFRTYEVV ANLSIVAEFP KLIAWAERCL KRESVAKVLP
201: DSDKVLKSVS DYRKNILGIN

Best Arabidopsis Sequence Match ( AT1G78320.1 )
(BLAST)

001: MEEEIILLDY WASMYGMRTR IALEEKKVKY EYREEDLSNK SPLLLQMNPI HKKIPVLIHE GKPICESIIQ VQYIDELWPD TNPILPSDPY QRAQARFWAD
101: YIDKKTYVPC KALWSESGEK QEAAKIEFIE VLKTLDSELG DKYYFGGNEF GLVDIAFIGF YSWFRTYEEV ANLSIVLEFP KLMAWAQRCL KRESVAKALP
201: DSDKVLKSVS DHRKIILGID

Arabidopsis Description

GSTU23Glutathione S-transferase U23 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.