Factsheet for Bra016252.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11636	Canola	mitochondrion	98.26	98.26
CDY38774	Canola	cytosol	99.13	89.41
Bra007889.1-P	Field mustard	mitochondrion	80.0	88.46
Bra024659.1-P	Field mustard	cytosol	79.13	80.18
Bra016253.1-P	Field mustard	cytosol	78.26	78.95
AT1G69920.1	Thale cress	cytosol	84.35	76.38
Bra012422.1-P	Field mustard	cytosol	64.35	74.75
CDY23534	Canola	cytosol, mitochondrion, plastid	58.7	73.77
Bra003970.1-P	Field mustard	cytosol	54.35	53.42
Bra016250.1-P	Field mustard	cytosol	53.91	52.99
Bra007890.1-P	Field mustard	cytosol	52.61	52.61
Bra019940.1-P	Field mustard	cytosol	48.7	49.34
Bra031708.1-P	Field mustard	cytosol	48.7	49.34
KRH69403	Soybean	extracellular	27.39	47.01
KRH74742	Soybean	nucleus	47.83	47.01
Bra027840.1-P	Field mustard	cytosol	46.52	45.73
KRH69402	Soybean	nucleus	45.65	45.26
KRH74740	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.09	45.11
GSMUA_Achr1P03800_001	Banana	cytosol	44.35	44.93
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.48	44.44
EER92034	Sorghum	endoplasmic reticulum	44.78	44.4
Os10t0481300-01	Rice	cytosol	38.7	43.63
Os10t0525800-00	Rice	cytosol	41.3	43.58
GSMUA_Achr5P10340_001	Banana	cytosol	43.48	43.1
KRH69404	Soybean	nucleus	43.04	42.67
Bra003645.1-P	Field mustard	cytosol	37.39	42.16
GSMUA_Achr5P10360_001	Banana	cytosol	43.48	41.84
TraesCS1B01G194900.1	Wheat	cytosol	43.04	41.77
Os10t0525500-01	Rice	cytosol, plastid	26.09	41.67
TraesCS5D01G200100.1	Wheat	cytosol	41.74	41.56
TraesCS1D01G189600.1	Wheat	cytosol	42.61	41.35
EER92036	Sorghum	cytosol	42.17	41.28
TraesCS5A01G190900.1	Wheat	cytosol	41.3	41.13
TraesCS5B01G192400.1	Wheat	cytosol	41.3	41.13
TraesCS1A01G187000.1	Wheat	cytosol	42.17	40.93
EES00905	Sorghum	cytosol	42.17	40.93
Bra003646.1-P	Field mustard	cytosol	38.7	40.83
Os10t0525400-01	Rice	cytosol, plastid	43.04	40.57
Bra003647.1-P	Field mustard	cytosol	38.7	40.45
HORVU1Hr1G049090.2	Barley	cytosol	41.74	40.34
Zm00001d027557_P001	Maize	cytosol	44.35	40.16
GSMUA_Achr5P10350_001	Banana	cytosol	40.87	39.83
HORVU5Hr1G058000.8	Barley	cytosol	40.0	39.66
Bra027842.1-P	Field mustard	cytosol	26.52	39.61
Bra025995.1-P	Field mustard	cytosol	36.96	39.53
Bra035029.1-P	Field mustard	cytosol	37.39	39.45
EER92035	Sorghum	cytosol	41.3	39.42
Bra003644.1-P	Field mustard	cytosol	36.96	38.81
HORVU1Hr1G049070.1	Barley	cytosol	41.74	37.07
Bra038140.1-P	Field mustard	cytosol	36.09	37.05
Bra026684.1-P	Field mustard	cytosol	35.22	36.99
Bra026681.1-P	Field mustard	cytosol	35.22	36.99
Bra016615.1-P	Field mustard	cytosol	34.78	36.53
Bra025994.1-P	Field mustard	cytosol	33.91	35.62
Bra026680.1-P	Field mustard	cytosol	33.91	35.62
Bra026679.1-P	Field mustard	cytosol	33.04	34.7
Bra025993.1-P	Field mustard	cytosol	33.04	34.55
Bra035031.1-P	Field mustard	cytosol	33.04	34.55
Bra034977.1-P	Field mustard	cytosol	32.61	33.04
Bra003648.1-P	Field mustard	cytosol	19.57	30.2
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	33.48	26.64
Bra008357.1-P	Field mustard	cytosol	10.87	21.93

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra016252	EnsemblPlants:Bra016252.1	EnsemblPlants:Bra016252.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4DIC5	PFAM:PF13417	PFAM:PF14497
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0002541916	SEG:seg	:	:	:

Description

AT1G69920 (E=2e-105) ATGSTU12 | ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12); glutathione transferase

Coordinates

chrA07:-:18638186..18639116

Molecular Weight (calculated)

25068.8 Da

IEP (calculated)

5.675

GRAVY (calculated)

-0.091

Length

230 amino acids

Sequence
(BLAST)

001: MAQNGSNSTV KLIGTWSSPF ALRARIALHL KSVEYEYIEE ADVLKSKSDL LLKSNPIHKK VPVLIHGDDS ICESLNIVQY VDEAWPSKLS ILPSNPKERA
101: SARFWAHFVD GKGFESIDAV AGAKDDAGRM AAAGNLMESL AALEEAFQKS SKGGEFFGGE NIGYVDIACG AIVGPLSVIE AFSGVKFLSQ DTTPGLVQWA
201: ERFRAHEAVK PYMPTVAEFV EFAKQKFNVQ

Best Arabidopsis Sequence Match ( AT1G69920.1 )
(BLAST)

001: MLKNKKSDNS LSRDTLQIKK RKKTTMAQNG SNTTVKLIGT WASPFAIRAQ VALHLKSVEH EYVEETDVLK GKSDLLIKSN PIHKKVPVLI HGDVSICESL
101: NIVQYVDESW PSDLSILPTL PSERAFARFW AHFVDGKLFE SIDAVAGAKD DAARMTLAGN LMENLAALEE AFQKSSKGGD FFGGGNIGFV DITVGAIVGP
201: ISVIEAFSGV KFLRPDTTPG LIQWAEKFRA HEAVKPYMPT VAEFIEFAKK KFSV

Arabidopsis Description

GSTU12Glutathione S-transferase U12 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.