CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92035	Sorghum	cytosol	77.02	75.1
EER92034	Sorghum	endoplasmic reticulum	60.43	61.21
PGSC0003DMT400058268	Potato	cytosol	26.81	57.8
EES00905	Sorghum	cytosol	52.77	52.32
CDX93432	Canola	cytosol	48.94	50.66
VIT_01s0026g01340.t01	Wine grape	cytosol	49.79	50.43
AT1G10360.1	Thale cress	cytosol	48.51	50.22
Bra019940.1-P	Field mustard	cytosol	48.51	50.22
Bra031708.1-P	Field mustard	cytosol	48.51	50.22
CDY34896	Canola	cytosol	48.51	50.22
CDY37984	Canola	cytosol	48.51	50.22
CDY07793	Canola	cytosol	34.04	50.0
Solyc05g026220.1.1	Tomato	cytosol	34.04	50.0
AT1G10370.1	Thale cress	cytosol	48.09	49.78
CDY37985	Canola	cytosol	48.09	49.78
Solyc05g006750.2.1	Tomato	cytosol	48.09	49.34
VIT_01s0026g01330.t01	Wine grape	cytosol	48.51	49.14
Solyc05g006740.2.1	Tomato	cytosol	44.68	49.07
Solyc05g006730.2.1	Tomato	mitochondrion	46.38	48.44
EER94598	Sorghum	cytosol	46.81	48.25
PGSC0003DMT400040670	Potato	cytosol	47.23	48.05
PGSC0003DMT400058271	Potato	cytosol	46.81	47.62
KRH74742	Soybean	nucleus	47.23	47.44
KRH69402	Soybean	nucleus	46.81	47.41
EES08965	Sorghum	endoplasmic reticulum	46.81	47.21
CDY16220	Canola	cytosol	45.11	46.7
CDY45140	Canola	cytosol	25.11	46.46
KRH74740	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.38	46.38
EER94597	Sorghum	cytosol	45.11	46.29
Bra024659.1-P	Field mustard	cytosol	44.68	46.26
CDY40288	Canola	cytosol, plastid	44.68	46.26
KRH69404	Soybean	nucleus	45.53	46.12
CDY14704	Canola	cytosol	44.68	46.05
Bra027840.1-P	Field mustard	cytosol	45.53	45.73
CDY30898	Canola	cytosol	45.53	45.73
EER94615	Sorghum	cytosol	46.38	45.61
PGSC0003DMT400095775	Potato	cytosol	37.45	45.6
EES03469	Sorghum	cytosol	45.96	45.38
EER92032	Sorghum	cytosol	45.53	45.34
AT1G59700.1	Thale cress	cytosol	45.11	45.3
AT1G27130.1	Thale cress	cytosol	43.4	44.93
KRH69403	Soybean	extracellular	25.53	44.78
EER94599	Sorghum	cytosol	44.68	44.68
EER94596	Sorghum	cytosol	43.83	44.4
EER94618	Sorghum	cytosol	40.85	44.04
EES03470	Sorghum	cytosol	44.68	43.93
Solyc05g026210.1.1	Tomato	nucleus	42.98	43.91
EER94607	Sorghum	cytosol	44.26	43.88
CDY28452	Canola	cytosol	36.6	43.88
CDX77247	Canola	cytosol	41.7	43.75
CDY45138	Canola	cytosol	41.28	43.69
VIT_01s0026g01380.t01	Wine grape	endoplasmic reticulum	48.09	43.3
EER94613	Sorghum	cytosol	42.98	43.16
PGSC0003DMT400019934	Potato	cytosol	40.0	42.92
EER94614	Sorghum	cytosol	44.26	42.62
CDY11637	Canola	mitochondrion	41.28	42.54
Bra012422.1-P	Field mustard	cytosol	35.74	42.42
CDY30896	Canola	cytosol	41.7	42.42
CDY25824	Canola	cytosol	36.17	42.29
Bra016252.1-P	Field mustard	cytosol	41.28	42.17
CDY11636	Canola	mitochondrion	41.28	42.17
Bra016253.1-P	Field mustard	cytosol	40.85	42.11
CDY38773	Canola	cytosol	40.85	42.11
KXG39035	Sorghum	cytosol	42.98	42.08
OQU92262	Sorghum	cytosol	43.4	41.98
Bra007889.1-P	Field mustard	mitochondrion	37.02	41.83
CDY56090	Canola	mitochondrion	37.02	41.83
EES03468	Sorghum	cytosol	44.26	41.77
EER94619	Sorghum	cytosol	42.13	41.6
CDY11635	Canola	cytosol	41.28	41.45
EES00904	Sorghum	mitochondrion	42.13	41.08
Bra016250.1-P	Field mustard	cytosol	40.85	41.03
CDY38775	Canola	cytosol	40.85	41.03
CDY56091	Canola	cytosol	40.0	40.87
EER92030	Sorghum	cytosol	41.28	40.76
EER94606	Sorghum	cytosol	40.85	40.68
Bra007890.1-P	Field mustard	cytosol	39.57	40.43
CDY65968	Canola	cytosol	39.57	40.43
AT1G59670.1	Thale cress	cytosol	40.0	40.34
Bra003970.1-P	Field mustard	cytosol	40.0	40.17
CDY23533	Canola	cytosol	40.0	40.17
CDY48383	Canola	cytosol	40.0	40.17
EER94605	Sorghum	cytosol	40.0	39.83
EER94604	Sorghum	cytosol	40.43	39.75
OQU92261	Sorghum	cytosol	47.66	39.58
AT1G27140.1	Thale cress	cytosol	40.85	39.51
AT1G69930.1	Thale cress	cytosol	38.72	38.89
EER97476	Sorghum	cytosol	37.45	38.6
CDY38774	Canola	cytosol	40.85	37.65
EER90776	Sorghum	cytosol	36.17	37.61
AT1G69920.1	Thale cress	cytosol	40.43	37.4
KRG99195	Soybean	cytosol	22.13	36.62
EER91171	Sorghum	cytosol	36.6	36.6
EER93341	Sorghum	cytosol	34.04	36.53
EES13278	Sorghum	cytosol	39.15	36.08
Bra027842.1-P	Field mustard	cytosol	23.4	35.71
OQU86987	Sorghum	cytosol	38.72	35.55
CDY23534	Canola	cytosol, mitochondrion, plastid	27.66	35.52
EER90777	Sorghum	cytosol	32.34	33.19
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.06	33.03
PGSC0003DMT400091065	Potato	cytosol	45.11	32.72
EER95876	Sorghum	cytosol	30.64	32.43
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	39.57	32.18
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.64	31.58

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8062887	UniProt:C5WUK3	EnsemblPlants:EER92036
ProteinID:EER92036	ProteinID:EER92036.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487
EnsemblPlantsGene:SORBI_3001G319700	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A81F07	RefSeq:XP_002465038.1

Description

hypothetical protein

Coordinates

chr1:+:60752843..60753967

Molecular Weight (calculated)

26097.3 Da

IEP (calculated)

7.179

GRAVY (calculated)

-0.140

Length

235 amino acids

Sequence
(BLAST)

001: MASGSEEKAA AVRVIGGWAC PYAIRVFAAL KLKGVEYEFL QEPAGRKSEL LLKSNPVYKK IPVLLHHGNP ICESMIIIQY IDEVWASYQP AILPTDPYAR
101: ANERFWAQYV DDKIAPAFLV LRGLTNGDKD EAAAQVSTAL EHLEEAFVKC SQGKHYFGGD RIGFLDLVLG SHLGWFKAVE KISGTKLLKE AKYPEITAWA
201: DRFCAHHAVK DVMPETDRLV EFSTNSALKA KPSSN

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.