CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013693_P001	Maize	cytosol	86.81	90.27
Os03t0643700-01	Rice	cytosol	71.49	72.41
TraesCS5B01G376800.1	Wheat	cytosol	66.81	71.36
TraesCS5A01G374800.1	Wheat	cytosol	67.23	71.17
TraesCS5D01G384400.1	Wheat	cytosol	65.96	69.82
HORVU5Hr1G092970.2	Barley	cytosol	48.94	67.65
EER90777	Sorghum	cytosol	54.04	55.46
GSMUA_Achr9P26040_001	Banana	cytosol	50.64	53.36
EER97476	Sorghum	cytosol	51.49	53.07
GSMUA_Achr9P26030_001	Banana	cytosol	50.21	52.44
EER90776	Sorghum	cytosol	50.21	52.21
GSMUA_Achr10P...	Banana	cytosol	49.36	52.02
EER93341	Sorghum	cytosol	45.96	49.32
VIT_04s0079g00360.t01	Wine grape	cytosol	45.96	49.09
GSMUA_Achr9P26050_001	Banana	cytosol	45.53	48.86
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.38	47.81
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.68	47.51
PGSC0003DMT400094585	Potato	cytosol	44.26	47.06
KRH17272	Soybean	cytosol	43.4	46.15
KRH72918	Soybean	cytosol	42.98	45.7
GSMUA_Achr9P26020_001	Banana	cytosol	44.26	45.41
Solyc02g081240.1.1	Tomato	cytosol	42.55	45.05
EER94597	Sorghum	cytosol	42.98	44.1
EER92032	Sorghum	cytosol	42.98	42.8
KXG39035	Sorghum	cytosol	42.55	41.67
EES03469	Sorghum	cytosol	42.13	41.6
EER94614	Sorghum	cytosol	42.98	41.39
EES00904	Sorghum	mitochondrion	42.13	41.08
EER94613	Sorghum	cytosol	40.85	41.03
EER92034	Sorghum	endoplasmic reticulum	40.43	40.95
EER94599	Sorghum	cytosol	40.85	40.85
EER94618	Sorghum	cytosol	37.87	40.83
EER94598	Sorghum	cytosol	39.57	40.79
EER94615	Sorghum	cytosol	41.28	40.59
EER94596	Sorghum	cytosol	40.0	40.52
EES08965	Sorghum	endoplasmic reticulum	40.0	40.34
EER94605	Sorghum	cytosol	40.0	39.83
EER95876	Sorghum	cytosol	37.45	39.64
OQU92262	Sorghum	cytosol	40.85	39.51
EES03470	Sorghum	cytosol	40.0	39.33
EER92030	Sorghum	cytosol	39.57	39.08
EER94604	Sorghum	cytosol	39.15	38.49
EES00905	Sorghum	cytosol	38.72	38.4
EER94619	Sorghum	cytosol	38.72	38.24
EER94606	Sorghum	cytosol	38.3	38.14
EER94607	Sorghum	cytosol	38.3	37.97
EES03468	Sorghum	cytosol	40.0	37.75
EES13278	Sorghum	cytosol	40.85	37.65
EER92036	Sorghum	cytosol	36.6	36.6
EER92035	Sorghum	cytosol	37.45	36.51
OQU86987	Sorghum	cytosol	36.6	33.59
OQU92261	Sorghum	cytosol	39.57	32.86
GSMUA_Achr9P26080_001	Banana	cytosol	51.49	26.89
GSMUA_Achr9P26060_001	Banana	cytosol	48.09	25.98
GSMUA_Achr9P26070_001	Banana	cytosol	45.96	13.74

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8062210	UniProt:C5WR73	ncoils:Coil
EnsemblPlants:EER91171	ProteinID:EER91171	ProteinID:EER91171.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF16	EnsemblPlantsGene:SORBI_3001G156000	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A820AA
RefSeq:XP_002464173.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:12624172..12626709

Molecular Weight (calculated)

24860.0 Da

IEP (calculated)

6.270

GRAVY (calculated)

0.192

Length

235 amino acids

Sequence
(BLAST)

001: MEGDKANGAS SGGGVVLLNC FVSPFGNRVR IALKLKGVAY EEKAENLAAK SPLLLSSNPV HGQVPVLIVG GKPVCESLVI LEFIDDAFSA AGKPPLLPAD
101: PYARAHARFW ASYVDTKLNA AGMRVWRAPK GAAAAVEEAK KDAVAALKTL EAELGGKPYF GGDALGYVDV ALVPFAPWFL TYERFGGFTV AGECPALAAW
201: ADRCVKENVC VAESLPEAEH VFQFVCGMRK AFGLD

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.