CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0530200-01	Rice	cytosol, extracellular	62.76	63.83
TraesCS1D01G014500.1	Wheat	cytosol	61.09	62.93
TraesCS1B01G021100.1	Wheat	cytosol	60.25	62.34
TraesCSU01G184900.1	Wheat	cytosol	60.25	62.07
TraesCS1A01G017400.1	Wheat	cytosol	60.25	62.07
TraesCSU01G183000.1	Wheat	cytosol	60.25	62.07
HORVU1Hr1G001560.6	Barley	cytosol	60.25	61.8
OQU92262	Sorghum	cytosol	62.76	61.73
TraesCS1D01G017000.1	Wheat	cytosol	59.83	61.64
TraesCS1A01G017300.1	Wheat	cytosol	59.83	61.64
TraesCS1B01G021400.1	Wheat	cytosol	60.67	61.44
TraesCS1D01G017200.1	Wheat	cytosol	54.39	61.03
EER94614	Sorghum	cytosol	61.51	60.25
EER94613	Sorghum	cytosol	58.58	59.83
TraesCS1A01G016800.1	Wheat	cytosol	59.0	59.75
EER94606	Sorghum	cytosol	59.0	59.75
EER94605	Sorghum	cytosol	58.58	59.32
EER92032	Sorghum	cytosol	56.9	57.63
EER94607	Sorghum	cytosol	56.49	56.96
EER94618	Sorghum	cytosol	51.88	56.88
EER94615	Sorghum	cytosol	56.49	56.49
EER94619	Sorghum	cytosol	55.65	55.88
EER94597	Sorghum	cytosol	52.72	55.02
KXG39035	Sorghum	cytosol	54.81	54.58
EER94598	Sorghum	cytosol	51.05	53.51
EES08965	Sorghum	endoplasmic reticulum	50.21	51.5
EER94599	Sorghum	cytosol	50.63	51.49
EES00904	Sorghum	mitochondrion	51.46	51.04
EES03469	Sorghum	cytosol	50.63	50.84
TraesCS6B01G429600.1	Wheat	cytosol	35.15	50.6
EES03470	Sorghum	cytosol	49.79	49.79
OQU92261	Sorghum	cytosol	58.16	49.12
EES03468	Sorghum	cytosol	51.05	49.0
EER94596	Sorghum	cytosol	47.28	48.71
EER92030	Sorghum	cytosol	46.86	47.06
OQU86987	Sorghum	cytosol	49.79	46.48
EES13278	Sorghum	cytosol	48.95	45.88
HORVU6Hr1G090560.2	Barley	plastid	54.81	44.11
TraesCS6B01G429400.2	Wheat	plastid	54.39	43.48
EER92034	Sorghum	endoplasmic reticulum	41.84	43.1
HORVU6Hr1G090600.6	Barley	plastid	53.56	43.1
EER97476	Sorghum	cytosol	40.59	42.54
EER92035	Sorghum	cytosol	42.68	42.32
TraesCS2B01G523700.1	Wheat	plastid	52.3	42.23
EER90776	Sorghum	cytosol	39.75	42.04
EER92036	Sorghum	cytosol	39.75	40.43
EES00905	Sorghum	cytosol	39.75	40.08
EER93341	Sorghum	cytosol	36.4	39.73
EER90777	Sorghum	cytosol	37.66	39.3
EER91171	Sorghum	cytosol	38.49	39.15
EER89978	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.24	39.04
OQU89319	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.47	36.2
EER95876	Sorghum	cytosol	28.45	30.63

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EntrezGene:8062883	UniProt:C5WUI2	EnsemblPlants:EER94604
ProteinID:EER94604	ProteinID:EER94604.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740
GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF477
EnsemblPlantsGene:SORBI_3001G317900	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A830AA	RefSeq:XP_002467606.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:60621797..60622662

Molecular Weight (calculated)

26194.8 Da

IEP (calculated)

8.047

GRAVY (calculated)

0.067

Length

239 amino acids

Sequence
(BLAST)

001: MSSAGNELKL LSTWFSPFGS RVKLALHLKG LSYEYVEEDL MNKSQLLLQS NPVHKKVPVL FHRGKALCES MVIVDYIEEA FPDAGPRLLP SDPYERAVAR
101: FWVAFIENKF VAPWCQMFDV TKTREEKAEG LKQILAARAT MEGALEEYSK QGKPFFGGDS VGCVDIALGG LLVWVRASEV LSGVKLLDAA TAPLLSAWAE
201: RFAALDAAKA ALPDFGRVLE YATKMRGPAA AKAVAVLNK

Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)

001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA

Arabidopsis Description

GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.