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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029696_P003 Maize cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 83.19 85.78
Zm00001d027557_P001 Maize cytosol 86.64 79.13
Os10t0525800-00 Rice cytosol 64.22 68.35
TraesCS1B01G194900.1 Wheat cytosol 67.67 66.24
Os10t0525500-01 Rice cytosol, plastid 40.95 65.97
TraesCS1A01G187000.1 Wheat cytosol 67.24 65.82
TraesCS1D01G189600.1 Wheat cytosol 67.24 65.82
Os10t0481300-01 Rice cytosol 57.76 65.69
HORVU1Hr1G049090.2 Barley cytosol 66.81 65.13
Os10t0525400-01 Rice cytosol, plastid 64.22 61.07
EER92036 Sorghum cytosol 61.21 60.43
HORVU1Hr1G049070.1 Barley cytosol 66.81 59.85
EER92035 Sorghum cytosol 60.34 58.09
PGSC0003DMT400058268 Potato cytosol 27.16 57.8
EES00905 Sorghum cytosol 52.16 51.05
VIT_01s0026g01330.t01 Wine grape cytosol 50.43 50.43
EER94598 Sorghum cytosol 49.14 50.0
VIT_01s0026g01340.t01 Wine grape cytosol 50.0 50.0
CDY45140 Canola cytosol 27.16 49.61
EER94597 Sorghum cytosol 48.71 49.34
Bra031708.1-P Field mustard cytosol 47.84 48.9
CDY34896 Canola cytosol 47.84 48.9
CDY07793 Canola cytosol 33.62 48.75
AT1G10360.1 Thale cress cytosol 47.41 48.46
Solyc05g026220.1.1 Tomato cytosol 33.19 48.12
AT1G10370.1 Thale cress cytosol 46.98 48.02
CDX93432 Canola cytosol 46.55 47.58
Bra019940.1-P Field mustard cytosol 46.12 47.14
CDY37984 Canola cytosol 46.12 47.14
CDY37985 Canola cytosol 46.12 47.14
PGSC0003DMT400058271 Potato cytosol 46.55 46.75
Solyc05g006740.2.1 Tomato cytosol 43.1 46.73
Solyc05g006750.2.1 Tomato cytosol 46.12 46.72
Solyc05g006730.2.1 Tomato mitochondrion 45.26 46.67
EER94618 Sorghum cytosol 43.53 46.33
KRH69403 Soybean extracellular 26.29 45.52
PGSC0003DMT400040670 Potato cytosol 45.26 45.45
EES03469 Sorghum cytosol 46.55 45.38
EER94613 Sorghum cytosol 45.69 45.3
CDY11636 Canola mitochondrion 44.83 45.22
PGSC0003DMT400095775 Potato cytosol 37.5 45.08
EES08965 Sorghum endoplasmic reticulum 45.26 45.06
Bra016252.1-P Field mustard cytosol 44.4 44.78
EES03470 Sorghum cytosol 46.12 44.77
EER94607 Sorghum cytosol 45.69 44.73
EER94599 Sorghum cytosol 45.26 44.68
EER94614 Sorghum cytosol 46.98 44.67
AT1G27130.1 Thale cress cytosol 43.53 44.49
AT1G59700.1 Thale cress cytosol 44.83 44.44
KRH74742 Soybean nucleus 44.83 44.44
KRH69402 Soybean nucleus 44.4 44.4
EER94615 Sorghum cytosol 45.69 44.35
CDX77247 Canola cytosol 42.67 44.2
EES03468 Sorghum cytosol 47.41 44.18
CDY45138 Canola cytosol 42.24 44.14
EER92032 Sorghum cytosol 44.83 44.07
CDY30898 Canola cytosol 44.4 44.02
KRH74740 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 44.4 43.83
EER94619 Sorghum cytosol 44.83 43.7
KRG99195 Soybean cytosol 26.72 43.66
Bra027840.1-P Field mustard cytosol 43.97 43.59
EER94596 Sorghum cytosol 43.53 43.53
CDY65968 Canola cytosol 43.1 43.48
EER94606 Sorghum cytosol 43.97 43.22
CDY16220 Canola cytosol 42.24 43.17
EES00904 Sorghum mitochondrion 44.83 43.15
KRH69404 Soybean nucleus 43.1 43.1
Solyc05g026210.1.1 Tomato nucleus 42.67 43.04
KXG39035 Sorghum cytosol 44.4 42.92
VIT_01s0026g01380.t01 Wine grape endoplasmic reticulum 48.28 42.91
CDY30896 Canola cytosol 42.67 42.86
Bra024659.1-P Field mustard cytosol 41.81 42.73
CDY40288 Canola cytosol, plastid 41.81 42.73
Bra007890.1-P Field mustard cytosol 42.24 42.61
CDY14704 Canola cytosol 41.81 42.54
AT1G59670.1 Thale cress cytosol 42.67 42.49
PGSC0003DMT400019934 Potato cytosol 40.09 42.47
EER92030 Sorghum cytosol 43.53 42.44
Bra007889.1-P Field mustard mitochondrion 37.93 42.31
Bra016250.1-P Field mustard cytosol 42.67 42.31
CDY11635 Canola cytosol 42.67 42.31
CDY38775 Canola cytosol 42.67 42.31
CDY56090 Canola mitochondrion 37.93 42.31
CDY56091 Canola cytosol 41.81 42.17
CDY11637 Canola mitochondrion 41.38 42.11
EER94604 Sorghum cytosol 43.1 41.84
Bra016253.1-P Field mustard cytosol 40.95 41.67
CDY38773 Canola cytosol 40.95 41.67
EER97476 Sorghum cytosol 40.95 41.67
EER90776 Sorghum cytosol 40.52 41.59
EER94605 Sorghum cytosol 42.24 41.53
Bra003970.1-P Field mustard cytosol 41.81 41.45
CDY23533 Canola cytosol 41.81 41.45
CDY48383 Canola cytosol 41.81 41.45
OQU92262 Sorghum cytosol 43.1 41.15
CDY28452 Canola cytosol 34.48 40.82
EER91171 Sorghum cytosol 40.95 40.43
CDY38774 Canola cytosol 44.4 40.39
EER93341 Sorghum cytosol 37.93 40.18
AT1G69930.1 Thale cress cytosol 40.52 40.17
Bra012422.1-P Field mustard cytosol 34.05 39.9
CDY25824 Canola cytosol 34.48 39.8
OQU92261 Sorghum cytosol 47.41 38.87
EES13278 Sorghum cytosol 42.24 38.43
AT1G27140.1 Thale cress cytosol 39.66 37.86
AT1G69920.1 Thale cress cytosol 40.95 37.4
OQU86987 Sorghum cytosol 40.09 36.33
Bra027842.1-P Field mustard cytosol 23.71 35.71
EER89978 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 34.91 35.53
EER95876 Sorghum cytosol 33.19 34.68
CDY23534 Canola cytosol, mitochondrion, plastid 27.16 34.43
OQU89319 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 32.76 34.39
EER90777 Sorghum cytosol 33.19 33.62
PGSC0003DMT400091065 Potato cytosol 44.83 32.1
GSMUA_Achr1P23320_001 Banana endoplasmic reticulum, plasma membrane 39.22 31.49
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10EntrezGene:8063176UniProt:C5WUK1EnsemblPlants:EER92034
ProteinID:EER92034ProteinID:EER92034.1GO:GO:0003674GO:GO:0003824GO:GO:0004364GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006749
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009407GO:GO:0009987GO:GO:0016740
GO:GO:0019748InterPro:GST_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045
InterPro:IPR010987PFAM:PF00043PFAM:PF02798PFscan:PS50404PFscan:PS50405PANTHER:PTHR11260
PANTHER:PTHR11260:SF488EnsemblPlantsGene:SORBI_3001G319500SUPFAM:SSF47616SUPFAM:SSF52833unigene:Sbi.3321InterPro:Thioredoxin-like_sf
UniParc:UPI0001A81F05RefSeq:XP_002465036.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr1:+:60742198..60743267
Molecular Weight (calculated)
25605.0 Da
IEP (calculated)
6.520
GRAVY (calculated)
0.045
Length
232 amino acids
Sequence
(BLAST)
001: MSEADVRVIG LWPSPFVIRV LIALKLKGVE YELVEEVVGK KSELLLRSNP VHKKIPVLLH HGKPISESLI IVQYIDEVWS SDTPAFLLPA DPYTRAVHRF
101: WAQYVDDKLP PAIRILRGTD GGGKDEAAEQ LSAALQLLEE AFTKLSQGKH YFGGDSVGYL DIALVSYVGW VKAVEKMAGV TLLDKAKVPN LVAWADRLCN
201: HPAVVESIPD ADKFVEFSVT YGSFSKPING PK
Best Arabidopsis Sequence Match ( AT1G10360.1 )
(BLAST)
001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA
Arabidopsis Description
GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.