Factsheet for PGSC0003DMT400058271

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g006740.2.1	Tomato	cytosol	87.88	94.86
PGSC0003DMT400040670	Potato	cytosol	76.62	76.62
VIT_01s0026g01340.t01	Wine grape	cytosol	69.7	69.4
VIT_01s0026g01330.t01	Wine grape	cytosol	68.4	68.1
PGSC0003DMT400058268	Potato	cytosol	31.17	66.06
AT1G10370.1	Thale cress	cytosol	61.04	62.11
Bra031708.1-P	Field mustard	cytosol	60.61	61.67
CDY34896	Canola	cytosol	60.61	61.67
AT1G10360.1	Thale cress	cytosol	59.74	60.79
Bra019940.1-P	Field mustard	cytosol	59.74	60.79
CDX93432	Canola	cytosol	59.31	60.35
CDY37984	Canola	cytosol	58.87	59.91
CDY37985	Canola	cytosol	58.87	59.91
CDY07793	Canola	cytosol	40.69	58.75
PGSC0003DMT400095775	Potato	cytosol	47.62	56.99
PGSC0003DMT400019934	Potato	cytosol	50.65	53.42
GSMUA_Achr5P10350_001	Banana	cytosol	51.52	50.42
GSMUA_Achr1P03800_001	Banana	cytosol	49.35	50.22
GSMUA_Achr5P10340_001	Banana	cytosol	49.78	49.57
Os10t0525800-00	Rice	cytosol	46.75	49.54
KRG99195	Soybean	cytosol	30.3	49.3
Os10t0481300-01	Rice	cytosol	43.29	49.02
GSMUA_Achr5P10360_001	Banana	cytosol	50.65	48.95
Os10t0525500-01	Rice	cytosol, plastid	30.3	48.61
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.75	48.0
EER92036	Sorghum	cytosol	47.62	46.81
EER92034	Sorghum	endoplasmic reticulum	46.75	46.55
TraesCS1B01G194900.1	Wheat	cytosol	46.32	45.15
PGSC0003DMT400079839	Potato	cytosol	42.42	44.55
TraesCS5D01G200100.1	Wheat	cytosol	44.16	44.16
TraesCS5A01G190900.1	Wheat	cytosol	44.16	44.16
EER92035	Sorghum	cytosol	45.89	43.98
PGSC0003DMT400071057	Potato	cytosol	41.56	43.84
PGSC0003DMT400079841	Potato	cytosol	41.56	43.64
TraesCS1D01G189600.1	Wheat	cytosol	44.59	43.46
TraesCS1A01G187000.1	Wheat	cytosol	44.59	43.46
TraesCS5B01G192400.1	Wheat	cytosol	43.29	43.29
HORVU1Hr1G049090.2	Barley	cytosol	44.59	43.28
PGSC0003DMT400037996	Potato	cytosol	40.69	42.73
Os10t0525400-01	Rice	cytosol, plastid	45.02	42.62
EES00905	Sorghum	cytosol	43.29	42.19
Zm00001d027557_P001	Maize	cytosol	45.89	41.73
PGSC0003DMT400037990	Potato	cytosol	39.39	41.36
PGSC0003DMT400037994	Potato	cytosol	39.39	41.36
HORVU5Hr1G058000.8	Barley	cytosol	40.69	40.52
PGSC0003DMT400079840	Potato	cytosol	35.93	40.29
PGSC0003DMT400079842	Potato	cytosol	38.53	40.09
PGSC0003DMT400054729	Potato	cytosol	38.1	39.82
PGSC0003DMT400091065	Potato	cytosol	55.84	39.81
HORVU1Hr1G049070.1	Barley	cytosol	44.59	39.77
PGSC0003DMT400071059	Potato	cytosol	37.23	39.09
PGSC0003DMT400037986	Potato	cytosol	35.06	38.94
PGSC0003DMT400092412	Potato	cytosol	36.36	38.36
PGSC0003DMT400038054	Potato	endoplasmic reticulum	36.36	38.36
PGSC0003DMT400020286	Potato	cytosol	32.9	37.25
PGSC0003DMT400094585	Potato	cytosol	35.06	36.65
PGSC0003DMT400020098	Potato	cytosol	36.8	33.46
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.68	32.95
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	35.93	28.72

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102590689	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M1C2E0	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400022624	PGSC:PGSC0003DMG400022624
EnsemblPlants:PGSC0003DMT400058271	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002949A5E	RefSeq:XP_006357238.1	SEG:seg	:

Description

Glutathione s-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400022624]

Coordinates

chr5:-:6394671..6397197

Molecular Weight (calculated)

25927.3 Da

IEP (calculated)

5.451

GRAVY (calculated)

-0.083

Length

231 amino acids

Sequence
(BLAST)

001: MAENDVKLLG SWPSTFVVRP RIALNVKSVC YDFLEEQLSS KSDLLLKSNP VYKKIPVLIH DGKSICESLN IVQYIDEKWT NSGPSILPLD PYDRAIARFW
101: ACYIDDKWFP IFRCLAVAQG EDAIKAALEP VFDGLVLLED AFKNCSKGKK FFGRDKIGYV DIALGCFLGW MKVTEKMNNV TLLDEAKTPG LYKWAEDFCA
201: DSSVKDVMPE TNKLAEAAKD LIPKIRANAS S

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.