Factsheet for PGSC0003DMT400037986

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079842	Potato	cytosol	98.56	92.34
Solyc07g056440.2.1	Tomato	cytosol	95.67	89.64
PGSC0003DMT400079840	Potato	cytosol	84.13	84.95
PGSC0003DMT400037996	Potato	cytosol	86.54	81.82
PGSC0003DMT400079841	Potato	cytosol	86.06	81.36
PGSC0003DMT400037990	Potato	cytosol	84.13	79.55
PGSC0003DMT400037994	Potato	cytosol	81.25	76.82
PGSC0003DMT400079839	Potato	cytosol	79.81	75.45
PGSC0003DMT400038054	Potato	endoplasmic reticulum	69.23	65.75
PGSC0003DMT400020286	Potato	cytosol	64.42	65.69
PGSC0003DMT400054729	Potato	cytosol	68.75	64.71
PGSC0003DMT400071059	Potato	cytosol	68.27	64.55
PGSC0003DMT400071057	Potato	cytosol	67.31	63.93
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.67	54.91
PGSC0003DMT400092412	Potato	cytosol	57.69	54.79
PGSC0003DMT400094585	Potato	cytosol	53.85	50.68
PGSC0003DMT400058268	Potato	cytosol	24.52	46.79
PGSC0003DMT400020098	Potato	cytosol	53.37	43.7
PGSC0003DMT400019934	Potato	cytosol	39.9	37.9
PGSC0003DMT400040670	Potato	cytosol	39.42	35.5
PGSC0003DMT400058271	Potato	cytosol	38.94	35.06
PGSC0003DMT400095775	Potato	cytosol	32.21	34.72
PGSC0003DMT400091065	Potato	cytosol	36.54	23.46

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M1B668
PFAM:PF02798	PFAM:PF13410	EnsemblPlantsGene:PGSC0003DMG400014654	PGSC:PGSC0003DMG400014654	EnsemblPlants:PGSC0003DMT400037986	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002952D19	SEG:seg	:	:	:	:

Description

Glutathione S-transferase/peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400014654]

Coordinates

chr1:+:88256440..88257947

Molecular Weight (calculated)

24139.2 Da

IEP (calculated)

5.834

GRAVY (calculated)

-0.358

Length

208 amino acids

Sequence
(BLAST)

001: MFGMRLRIAL AEKEIKYEYK EEEGLITNKS SLLLEMNPIH KKVPVLIHNG KPICESIIGV EYIEEVWKDK APLLPSDPYE RAQARFWADY IDKKLYISSR
101: KIWGTKGEEQ EAGKKDFIEV LKVLEGELGE KPYFGGDNFG FVDIALIGFY SWFYAYETCG NFSTEAECPK FVAWAKRCMQ RDSVAKSLPD QHKVLEFIQM
201: LRQKFGIE

Best Arabidopsis Sequence Match ( AT1G17170.1 )
(BLAST)

001: MADEVILLDF WASMFGMRTR IALAEKRVKY DHREEDLWNK SSLLLEMNPV HKKIPVLIHN GKPVCESLIQ IEYIDETWPD NNPLLPSDPY KRAHAKFWAD
101: FIDKKVNVTA RRIWAVKGEE QEAAKELIEI LKTLESELGD KKYFGDETFG YVDIALIGFH SWFAVYEKFG NVSIESECSK LVAWAKRCLE RESVAKALPE
201: SEKVITFISE RRKKLGLE

Arabidopsis Description

GSTU24Glutathione S-transferase U24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.