Factsheet for PGSC0003DMT400037990

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g056450.2.1	Tomato	cytosol	56.36	89.21
PGSC0003DMT400037996	Potato	cytosol	85.0	85.0
PGSC0003DMT400079842	Potato	cytosol	85.45	84.68
PGSC0003DMT400037986	Potato	cytosol	79.55	84.13
PGSC0003DMT400079841	Potato	cytosol	82.27	82.27
PGSC0003DMT400079840	Potato	cytosol	75.91	81.07
PGSC0003DMT400037994	Potato	cytosol	80.91	80.91
PGSC0003DMT400079839	Potato	cytosol	80.45	80.45
PGSC0003DMT400054729	Potato	cytosol	67.73	67.42
PGSC0003DMT400038054	Potato	endoplasmic reticulum	66.82	67.12
PGSC0003DMT400071059	Potato	cytosol	66.82	66.82
PGSC0003DMT400020286	Potato	cytosol	60.0	64.71
PGSC0003DMT400071057	Potato	cytosol	64.09	64.38
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.36	58.96
PGSC0003DMT400092412	Potato	cytosol	58.64	58.9
PGSC0003DMT400094585	Potato	cytosol	55.0	54.75
PGSC0003DMT400058268	Potato	cytosol	24.09	48.62
PGSC0003DMT400020098	Potato	cytosol	53.18	46.06
PGSC0003DMT400058271	Potato	cytosol	41.36	39.39
PGSC0003DMT400019934	Potato	cytosol	38.64	38.81
PGSC0003DMT400040670	Potato	cytosol	40.0	38.1
PGSC0003DMT400095775	Potato	cytosol	30.91	35.23
PGSC0003DMT400091065	Potato	cytosol	37.27	25.31

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M1B669
PFAM:PF02798	PFAM:PF13410	EnsemblPlantsGene:PGSC0003DMG400014655	PGSC:PGSC0003DMG400014655	EnsemblPlants:PGSC0003DMT400037990	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000295EA87	SEG:seg	:	:	:	:

Description

Glutathione S-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400014655]

Coordinates

chr1:+:88260213..88261601

Molecular Weight (calculated)

25540.7 Da

IEP (calculated)

4.924

GRAVY (calculated)

-0.285

Length

220 amino acids

Sequence
(BLAST)

001: MVNDEVILLD FWPSMFGMRL RIALAEKEVK YEYKEEDLWN KSTLLLEMNP IHKKVPVLIH NGKPICESII GVEYIEEVWK DKTPLLPSDP YERAQARFWA
101: DYINKRLFDL GKKIWSTKGE EQEAAKNDFI ECLKILEGAL GEKPYFGGDN FGFVDIALIG YYSWFYAYET YGSFSIEAEC PKLVAWAKRC MQRDSVANSL
201: PDQHKVCEFV SVARQKLGIE

Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)

001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E

Arabidopsis Description

GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.